Factsheet for Zm00001d005919_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96881	Sorghum	cytosol, nucleus, peroxisome, plastid	91.12	86.67
Zm00001d020763_P001	Maize	nucleus	87.85	82.46
TraesCS5A01G245600.1	Wheat	nucleus	65.42	72.54
TraesCS5B01G243000.1	Wheat	nucleus	66.36	67.94
TraesCS5D01G252300.1	Wheat	nucleus	64.95	66.51
HORVU5Hr1G069580.1	Barley	nucleus	64.95	66.19
GSMUA_Achr3P06780_001	Banana	cytosol	54.67	57.07
Zm00001d031818_P001	Maize	nucleus	60.75	54.39
GSMUA_Achr9P15140_001	Banana	plastid	54.67	50.87
VIT_18s0001g07410.t01	Wine grape	nucleus	38.78	37.56
CDX90384	Canola	cytosol	25.7	33.74
KRH16843	Soybean	cytosol	37.38	33.33
KRH72457	Soybean	nucleus	38.32	32.28
PGSC0003DMT400060615	Potato	cytosol	32.71	31.25
PGSC0003DMT400024185	Potato	nucleus	28.5	29.9
Solyc04g076240.1.1	Tomato	nucleus	28.04	29.27
Zm00001d034596_P001	Maize	nucleus	28.5	26.64
Zm00001d039764_P001	Maize	nucleus	32.24	26.44
Solyc04g014360.2.1	Tomato	nucleus	32.71	25.83
Bra010635.1-P	Field mustard	plastid	26.64	25.45
KRH69661	Soybean	mitochondrion	24.77	25.0
Zm00001d037528_P001	Maize	plastid	30.84	24.26
AT4G38070.1	Thale cress	plastid	26.64	22.27
Zm00001d005740_P001	Maize	nucleus	35.98	22.13
Zm00001d032213_P001	Maize	nucleus	35.51	21.53
Zm00001d050394_P001	Maize	nucleus	36.45	21.08
Zm00001d028504_P001	Maize	nucleus	35.51	19.44
Zm00001d047878_P001	Maize	nucleus	31.31	15.69
CDY52514	Canola	cytosol	26.64	3.96

Protein Annotations

EntrezGene:100274144	MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A060D7Y3	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EMBL:KJ727968
ProteinID:ONM22360.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF185	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002218822	EnsemblPlantsGene:Zm00001d005919	EnsemblPlants:Zm00001d005919_P001	EnsemblPlants:Zm00001d005919_T001	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

bHLH-transcription factor 169Transcription factor bHLH51

Coordinates

chr2:+:192761281..192762454

Molecular Weight (calculated)

23007.3 Da

IEP (calculated)

9.500

GRAVY (calculated)

-0.422

Length

214 amino acids

Sequence
(BLAST)

001: MDRECSPLAA TTRSGTGRSH SEAERKRRQR INAHLATLRT LLPAASRMDK AALLGEVVRH VRELRGEADA AAAGAAVAVP GEGDEVGVEE GHQHRFCHGG
101: ERAARRVRAW VCCADRPGLM SELGRAVRSV SARAVRAEIA TVGGRTRSVL ELDVGGRHHD GEGTSTSSRP ALQAALRAVL LSREEMLGAE CYKRQRFSAH
201: LARVYDSGAV EVTD

Best Arabidopsis Sequence Match ( AT4G38070.1 )
(BLAST)

001: MVLLHHVSLS HYQNSSSLFS SSSESILCLF LVLCVMQLEQ GMRPISRCYN PTAYSTTMGR SFFAGAATSS KLFSRGFSVT KPKSKTESKE VAAKKHSDAE
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ

Arabidopsis Description

BHLH131Transcription factor bHLH131 [Source:UniProtKB/Swiss-Prot;Acc:P0CB25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.