Factsheet for Zm00001d020763_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005919_P001	Maize	nucleus	82.46	87.85
TraesCS5A01G245600.1	Wheat	nucleus	64.04	75.65
TraesCS5D01G252300.1	Wheat	nucleus	65.35	71.29
TraesCS5B01G243000.1	Wheat	nucleus	65.35	71.29
HORVU5Hr1G069580.1	Barley	nucleus	64.04	69.52
GSMUA_Achr3P06780_001	Banana	cytosol	51.32	57.07
Zm00001d031818_P001	Maize	nucleus	58.77	56.07
GSMUA_Achr9P15140_001	Banana	plastid	53.07	52.61
VIT_18s0001g07410.t01	Wine grape	nucleus	37.28	38.46
KRH16843	Soybean	cytosol	36.84	35.0
CDX90384	Canola	cytosol	24.12	33.74
KRH72457	Soybean	nucleus	37.28	33.46
PGSC0003DMT400060615	Potato	cytosol	30.26	30.8
PGSC0003DMT400024185	Potato	nucleus	27.19	30.39
Solyc04g076240.1.1	Tomato	nucleus	26.75	29.76
Zm00001d039764_P001	Maize	nucleus	31.14	27.2
Zm00001d034596_P001	Maize	nucleus	26.75	26.64
Bra010635.1-P	Field mustard	plastid	25.88	26.34
Solyc04g014360.2.1	Tomato	nucleus	30.7	25.83
Zm00001d037528_P001	Maize	plastid	30.7	25.74
KRH69661	Soybean	mitochondrion	23.68	25.47
AT4G38070.1	Thale cress	plastid	26.32	23.44
Zm00001d005740_P001	Maize	nucleus	34.65	22.7
Zm00001d032213_P001	Maize	nucleus	35.09	22.66
Zm00001d050394_P001	Maize	nucleus	35.09	21.62
Zm00001d028504_P001	Maize	nucleus	34.65	20.2
Zm00001d047878_P001	Maize	nucleus	30.7	16.39
CDY52514	Canola	cytosol	25.88	4.1

Protein Annotations

EnsemblPlants:Zm00001d020763_P001	EnsemblPlants:Zm00001d020763_T001	EnsemblPlantsGene:Zm00001d020763	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF185	PFAM:PF00010	PFscan:PS50888	ProteinID:ONM55541.1	SEG:seg
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000221633A	UniProt:A0A1D6I624	MapMan:15.5.32	:

Description

bHLH-transcription factor 107DNA binding protein

Coordinates

chr7:+:131556875..131558045

Molecular Weight (calculated)

24187.6 Da

IEP (calculated)

8.638

GRAVY (calculated)

-0.390

Length

228 amino acids

Sequence
(BLAST)

001: MMVPVGSDDE TADVAMDRES SPPAATTRSG GTSRSHSEAE RKRRQRINAH LATLRTLLPA ASRMDKAALL GEVVRHVREL RGEADAAAAG AAVAVPGEGD
101: EVGVEEGQQR CFCHHGGGER ERAAAASARR VRAWVCCADR PGLMSELGRA VRSVSARAVR AEIATVGGRT RSVLELDVGG QHNGDDAGTS SRPALQAALR
201: AVLLSREDML GAECCYKRQR FSAHLARV

Best Arabidopsis Sequence Match ( AT4G38070.1 )
(BLAST)

001: MVLLHHVSLS HYQNSSSLFS SSSESILCLF LVLCVMQLEQ GMRPISRCYN PTAYSTTMGR SFFAGAATSS KLFSRGFSVT KPKSKTESKE VAAKKHSDAE
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ

Arabidopsis Description

BHLH131Transcription factor bHLH131 [Source:UniProtKB/Swiss-Prot;Acc:P0CB25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.