Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P15140_001 | Banana | plastid | 81.95 | 73.04 |
| TraesCS5A01G245600.1 | Wheat | nucleus | 54.15 | 57.51 |
| Zm00001d005919_P001 | Maize | nucleus | 57.07 | 54.67 |
| TraesCS5D01G252300.1 | Wheat | nucleus | 54.15 | 53.11 |
| TraesCS5B01G243000.1 | Wheat | nucleus | 54.15 | 53.11 |
| EER96881 | Sorghum | cytosol, nucleus, peroxisome, plastid | 58.05 | 52.89 |
| HORVU5Hr1G069580.1 | Barley | nucleus | 53.66 | 52.38 |
| Zm00001d020763_P001 | Maize | nucleus | 57.07 | 51.32 |
| TraesCS2A01G472300.1 | Wheat | nucleus | 51.22 | 50.0 |
| TraesCS2B01G494900.1 | Wheat | nucleus | 50.73 | 49.29 |
| Os08t0477900-00 | Rice | nucleus | 53.17 | 48.88 |
| TraesCS2D01G472000.1 | Wheat | nucleus | 50.73 | 47.93 |
| Zm00001d031818_P001 | Maize | nucleus | 55.12 | 47.28 |
| EES14023 | Sorghum | nucleus | 54.15 | 45.49 |
| VIT_18s0001g07410.t01 | Wine grape | nucleus | 41.95 | 38.91 |
| GSMUA_Achr6P30610_001 | Banana | nucleus | 35.12 | 37.7 |
| GSMUA_Achr7P07280_001 | Banana | nucleus | 33.66 | 35.75 |
| GSMUA_Achr1P21280_001 | Banana | nucleus | 34.15 | 35.18 |
| GSMUA_Achr11P... | Banana | nucleus | 34.15 | 35.18 |
| CDX90384 | Canola | cytosol | 27.32 | 34.36 |
| KRH16843 | Soybean | cytosol | 40.0 | 34.17 |
| KRH72457 | Soybean | nucleus | 41.95 | 33.86 |
| PGSC0003DMT400060615 | Potato | cytosol | 35.61 | 32.59 |
| PGSC0003DMT400024185 | Potato | nucleus | 31.22 | 31.37 |
| Solyc04g076240.1.1 | Tomato | nucleus | 30.73 | 30.73 |
| GSMUA_Achr5P29390_001 | Banana | nucleus | 33.17 | 29.18 |
| GSMUA_Achr8P23980_001 | Banana | nucleus | 31.71 | 28.63 |
| GSMUA_Achr3P03510_001 | Banana | nucleus | 32.2 | 27.39 |
| KRH69661 | Soybean | mitochondrion | 28.29 | 27.36 |
| Solyc04g014360.2.1 | Tomato | nucleus | 35.61 | 26.94 |
| GSMUA_Achr7P10740_001 | Banana | nucleus | 31.71 | 25.9 |
| Bra010635.1-P | Field mustard | plastid | 27.8 | 25.45 |
| GSMUA_Achr2P20040_001 | Banana | nucleus | 30.73 | 25.3 |
| GSMUA_Achr10P... | Banana | nucleus | 30.73 | 24.61 |
| GSMUA_Achr7P21370_001 | Banana | nucleus | 32.68 | 22.79 |
| AT4G38070.1 | Thale cress | plastid | 28.29 | 22.66 |
| CDY52514 | Canola | cytosol | 27.8 | 3.96 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P06780_001 | EnsemblPlants:GSMUA_Achr3T06780_001 | EnsemblPlantsGene:GSMUA_Achr3G06780_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF185 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000294D302 | UniProt:M0SCE5 | MapMan:15.5.32 | : | : |
Description
basic helix-loop-helix, putative [Source:GMGC_GENE;Acc:GSMUA_Achr3G06780_001]
Coordinates
chr3:-:4570408..4571108
Molecular Weight (calculated)
22355.9 Da
IEP (calculated)
10.932
GRAVY (calculated)
-0.422
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPVETGKAV RETRMENGGG DSTTLSTRTA AEVRAIRSHS EAERRRRQRI NGHLATLRSL LPAATRLDKA ALLGEVVRQV RELRGRVEEV AVVVPGEGDE
101: VGVEEGEESG GRVVRAWVCC ADRPGLMGEL SRAVRSVRAR AVRVEMVTVG GRTRSLLELE VGEAEKGDGR SALQAALWAV LLTNRAGPGE NYCKRARMST
201: RFNRT
101: VGVEEGEESG GRVVRAWVCC ADRPGLMGEL SRAVRSVRAR AVRVEMVTVG GRTRSLLELE VGEAEKGDGR SALQAALWAV LLTNRAGPGE NYCKRARMST
201: RFNRT
001: MVLLHHVSLS HYQNSSSLFS SSSESILCLF LVLCVMQLEQ GMRPISRCYN PTAYSTTMGR SFFAGAATSS KLFSRGFSVT KPKSKTESKE VAAKKHSDAE
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ
Arabidopsis Description
BHLH131Transcription factor bHLH131 [Source:UniProtKB/Swiss-Prot;Acc:P0CB25]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.