Factsheet for GSMUA_Achr3P03510_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P20040_001	Banana	nucleus	73.03	70.68
GSMUA_Achr10P...	Banana	nucleus	74.69	70.31
GSMUA_Achr7P10740_001	Banana	nucleus	62.24	59.76
VIT_12s0028g02350.t01	Wine grape	nucleus	51.04	47.49
GSMUA_Achr7P07280_001	Banana	nucleus	36.93	46.11
VIT_10s0003g01160.t01	Wine grape	nucleus	30.29	45.91
GSMUA_Achr6P30610_001	Banana	nucleus	36.1	45.55
GSMUA_Achr11P...	Banana	nucleus	36.93	44.72
GSMUA_Achr1P21280_001	Banana	nucleus	36.51	44.22
KXG31555	Sorghum	nucleus	48.55	43.33
Solyc07g053290.2.1	Tomato	nucleus	45.64	43.14
PGSC0003DMT400052622	Potato	nucleus	45.64	43.14
VIT_14s0068g01580.t01	Wine grape	nucleus	46.89	42.97
TraesCS3D01G144700.1	Wheat	nucleus	45.23	42.75
HORVU3Hr1G027630.3	Barley	nucleus	44.4	42.46
TraesCS3A01G142900.1	Wheat	nucleus	45.64	42.31
KRH27035	Soybean	nucleus	43.57	42.17
PGSC0003DMT400026449	Potato	mitochondrion	40.66	41.7
KRH22294	Soybean	nucleus	42.74	41.37
KRH50172	Soybean	nucleus	46.47	41.03
KRH71297	Soybean	nucleus	45.23	40.22
KRH55806	Soybean	nucleus	43.15	40.15
Solyc02g076920.2.1	Tomato	cytosol, nucleus, plastid	39.83	40.0
KRH25720	Soybean	extracellular, nucleus	42.74	39.92
Os01t0218100-01	Rice	nucleus	43.98	39.7
GSMUA_Achr5P29390_001	Banana	nucleus	32.37	33.48
GSMUA_Achr3P06780_001	Banana	cytosol	27.39	32.2
GSMUA_Achr8P23980_001	Banana	nucleus	30.29	32.16
GSMUA_Achr9P15140_001	Banana	plastid	27.39	28.7
GSMUA_Achr7P21370_001	Banana	nucleus	29.88	24.49

Protein Annotations

EnsemblPlants:GSMUA_Achr3P03510_001	EnsemblPlants:GSMUA_Achr3T03510_001	EnsemblPlantsGene:GSMUA_Achr3G03510_001	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF201	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000294E0E1	UniProt:M0SBG9	MapMan:15.5.32	:	:

Description

Putative Transcription factor bHLH30 [Source:GMGC_GENE;Acc:GSMUA_Achr3G03510_001]

Coordinates

chr3:+:2279548..2281223

Molecular Weight (calculated)

26517.0 Da

IEP (calculated)

10.428

GRAVY (calculated)

-0.360

Length

241 amino acids

Sequence
(BLAST)

001: MGSVPVGDSG FCRRFPNGLG FDFGSDGSSS SMVLDQERRA PSRLGGKRVG AGILDAKTAM AMKSHSEAER RRRERINGHL AVLRSMVPCD DKMDKAALLA
101: QVISHVKKLK RNAAEINKSY TVPSDTDEVR VEVEGDMTIA GRLMVRASLC CDDRPEILAD LRQALSGLHL KTVRAEISTL GGRMKNVLTM TSEGTFSNVD
201: KHLFVASVHQ ALNSILDRVK SREDFLPRAS FSNKRQRISP F

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.