CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G144700.1	Wheat	nucleus	58.89	62.35
TraesCS3A01G142900.1	Wheat	nucleus	59.63	61.92
HORVU3Hr1G027630.3	Barley	nucleus	57.78	61.9
Os01t0218100-01	Rice	nucleus	58.15	58.8
GSMUA_Achr3P03510_001	Banana	nucleus	43.33	48.55
GSMUA_Achr2P20040_001	Banana	nucleus	42.59	46.18
GSMUA_Achr10P...	Banana	nucleus	43.7	46.09
GSMUA_Achr7P10740_001	Banana	nucleus	41.48	44.62
Solyc07g053290.2.1	Tomato	nucleus	39.26	41.57
PGSC0003DMT400052622	Potato	nucleus	39.26	41.57
VIT_10s0003g01160.t01	Wine grape	nucleus	24.07	40.88
VIT_14s0068g01580.t01	Wine grape	nucleus	39.26	40.3
VIT_12s0028g02350.t01	Wine grape	nucleus	38.52	40.15
Solyc02g076920.2.1	Tomato	cytosol, nucleus, plastid	35.56	40.0
KRH27035	Soybean	nucleus	36.67	39.76
KRH22294	Soybean	nucleus	36.67	39.76
PGSC0003DMT400026449	Potato	mitochondrion	34.07	39.15
KRH50172	Soybean	nucleus	38.15	37.73
KRH55806	Soybean	nucleus	35.19	36.68
KRH25720	Soybean	extracellular, nucleus	34.81	36.43
KRH71297	Soybean	nucleus	35.19	35.06
EES00272	Sorghum	plastid	28.52	31.82
EER96881	Sorghum	cytosol, nucleus, peroxisome, plastid	25.56	30.67
EES19097	Sorghum	nucleus, plastid	25.56	30.0
EES14023	Sorghum	nucleus	25.93	28.69
EER93220	Sorghum	nucleus	25.19	25.47
EER98886	Sorghum	nucleus	30.74	23.51
EES15038	Sorghum	nucleus	32.59	22.45
OQU92884	Sorghum	nucleus	32.22	19.55

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:8079506	UniProt:A0A1B6Q0Z4	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KXG31555
ProteinID:KXG31555	ProteinID:KXG31555.2	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF201
SMART:SM00353	EnsemblPlantsGene:SORBI_3003G017601	SUPFAM:SSF47459	UniParc:UPI0001A84E80	RefSeq:XP_002457128.1	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:1566767..1569070

Molecular Weight (calculated)

28265.4 Da

IEP (calculated)

6.949

GRAVY (calculated)

-0.179

Length

270 amino acids

Sequence
(BLAST)

001: MDMGSVPFAD AGLLDAFYGG GHGHNDYGLV SQQLTSPVVL DGGAGGLLDA GAASTEEEAP KRKGDHRRDD KAAMALKNHS EAERRRRERI NAHLATLRTM
101: VPCSDKMDKA ALLAEVITHV QKLKATAARI RDHCAVPADA DDVAVELVQG APPSTTGGGV LVRATLSCDD GADVFADVKQ ALRPLRLSVV GSEVTTLGGR
201: VRFTFLIMSS SSSCGNGSGG DVGAVVVESV HQALQSVLDR ANSALEFAPR ASLLNKRRRV STFESSSSSS

Best Arabidopsis Sequence Match ( AT3G25710.1 )
(BLAST)

001: MYAMKEEDCL QTFHNLQDYQ DQFHLHHHPQ ILPWSSTSLP SFDPLHFPSN PTRYSDPVHY FNRRASSSSS SFDYNDGFVS PPPSMDHPQN HLRILSEALG
101: PIMRRGSSFG FDGEIMGKLS AQEVMDAKAL AASKSHSEAE RRRRERINTH LAKLRSILPN TTKTDKASLL AEVIQHMKEL KRQTSQITDT YQVPTECDDL
201: TVDSSYNDEE GNLVIRASFC CQDRTDLMHD VINALKSLRL RTLKAEIATV GGRVKNILFL SREYDDEEDH DSYRRNFDGD DVEDYDEERM MNNRVSSIEE
301: ALKAVIEKCV HNNDESNDNN NLEKSSSGGI KRQRTSKMVN RCYN

Arabidopsis Description

BHLH32Transcription factor AIG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS08]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.