CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037528_P001	Maize	plastid	70.87	59.93
TraesCS1A01G110400.1	Wheat	plastid	48.26	52.36
TraesCS1D01G112000.1	Wheat	plastid	47.83	52.13
TraesCS1B01G129200.1	Wheat	plastid	46.09	50.0
HORVU1Hr1G024280.2	Barley	plastid	45.65	49.53
EES00272	Sorghum	plastid	50.87	48.35
Os05t0163900-01	Rice	nucleus	49.57	42.07
GSMUA_Achr5P29390_001	Banana	nucleus	36.52	36.05
Solyc03g095980.2.1	Tomato	nucleus	28.26	31.1
EER96881	Sorghum	cytosol, nucleus, peroxisome, plastid	30.0	30.67
PGSC0003DMT400071293	Potato	nucleus	29.13	29.91
EES14023	Sorghum	nucleus	29.13	27.46
PGSC0003DMT400040448	Potato	nucleus	26.52	27.11
Solyc06g051260.2.1	Tomato	nucleus	25.65	26.22
KRH14931	Soybean	nucleus, plastid	29.57	25.76
KXG31555	Sorghum	nucleus	30.0	25.56
KRG97707	Soybean	nucleus	30.0	25.09
KRH31167	Soybean	nucleus	30.0	24.64
Bra017024.1-P	Field mustard	nucleus, plastid	26.09	23.72
AT2G40200.1	Thale cress	nucleus	26.09	23.62
CDY24921	Canola	nucleus	24.35	23.33
CDY07066	Canola	nucleus, plastid	25.65	23.32
CDY07615	Canola	nucleus	23.48	23.18
Bra000177.1-P	Field mustard	nucleus	23.48	23.18
KRH73206	Soybean	golgi, nucleus	29.57	23.13
VIT_13s0067g01350.t01	Wine grape	nucleus	29.13	22.56
CDX93211	Canola	nucleus, plastid	24.78	22.53
EER93220	Sorghum	nucleus	25.65	22.1
EER98886	Sorghum	nucleus	27.39	17.85
EES15038	Sorghum	nucleus	28.26	16.58
OQU92884	Sorghum	nucleus	30.0	15.51

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:8080926	UniProt:C5Z0Z9	EnsemblPlants:EES19097	ProteinID:EES19097
ProteinID:EES19097.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	ProteinID:KXG21400.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565
PANTHER:PTHR12565:SF130	SMART:SM00353	EnsemblPlantsGene:SORBI_3009G057000	SUPFAM:SSF47459	UniParc:UPI0001A88D6A	RefSeq:XP_002440667.1
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:5838644..5840316

Molecular Weight (calculated)

24728.6 Da

IEP (calculated)

10.594

GRAVY (calculated)

-0.411

Length

230 amino acids

Sequence
(BLAST)

001: MSSSTPRKIS TAEAQEALKI HSEAERRRRE RINAHLATLR RMIPDARQMD KATLLAQVVS QLKELKKKTA ETTTQTPPAT TIPAEANGIA VHCYTGAAAV
101: TGYGRPPPAA TYVRASVSCD DRPGLHADLA AAFRTMRLRP VRADVAALGG RAQCDFLLCR EEGGGVMTSA AAGGRDLRAL EEGVRRELAR AAFPETTTTT
201: TYGCNGTRSR RQRLVGSSHC VLLGHGHGLR

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.