Factsheet for GSMUA_Achr10P14370_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P03510_001	Banana	nucleus	70.31	74.69
GSMUA_Achr2P20040_001	Banana	nucleus	71.48	73.49
GSMUA_Achr7P10740_001	Banana	nucleus	66.02	67.33
KRH27035	Soybean	nucleus	48.05	49.4
KRH22294	Soybean	nucleus	48.05	49.4
VIT_12s0028g02350.t01	Wine grape	nucleus	48.83	48.26
VIT_10s0003g01160.t01	Wine grape	nucleus	29.3	47.17
GSMUA_Achr7P07280_001	Banana	nucleus	34.77	46.11
GSMUA_Achr6P30610_001	Banana	nucleus	34.38	46.07
KRH50172	Soybean	nucleus	48.83	45.79
TraesCS3A01G142900.1	Wheat	nucleus	46.48	45.77
VIT_14s0068g01580.t01	Wine grape	nucleus	46.88	45.63
TraesCS3D01G144700.1	Wheat	nucleus	45.31	45.49
Solyc07g053290.2.1	Tomato	nucleus	45.31	45.49
PGSC0003DMT400052622	Potato	nucleus	45.31	45.49
KRH55806	Soybean	nucleus	45.7	45.17
HORVU3Hr1G027630.3	Barley	nucleus	44.14	44.84
KRH25720	Soybean	extracellular, nucleus	44.92	44.57
KXG31555	Sorghum	nucleus	46.09	43.7
KRH71297	Soybean	nucleus	46.09	43.54
PGSC0003DMT400026449	Potato	mitochondrion	39.45	42.98
GSMUA_Achr1P21280_001	Banana	nucleus	32.81	42.21
GSMUA_Achr11P...	Banana	nucleus	32.42	41.71
Solyc02g076920.2.1	Tomato	cytosol, nucleus, plastid	39.06	41.67
Os01t0218100-01	Rice	nucleus	41.8	40.07
GSMUA_Achr5P29390_001	Banana	nucleus	30.08	33.05
GSMUA_Achr8P23980_001	Banana	nucleus	28.91	32.6
GSMUA_Achr3P06780_001	Banana	cytosol	24.61	30.73
GSMUA_Achr9P15140_001	Banana	plastid	25.78	28.7
GSMUA_Achr7P21370_001	Banana	nucleus	29.3	25.51

Protein Annotations

EnsemblPlants:GSMUA_Achr10P14370_001	EnsemblPlants:GSMUA_Achr10T14370_001	EnsemblPlantsGene:GSMUA_Achr10G14370_001	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF82	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000296735E	UniProt:M0RI63	MapMan:15.5.32	:	:

Description

Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G14370_001]

Coordinates

chr10:-:22665176..22666612

Molecular Weight (calculated)

27818.4 Da

IEP (calculated)

10.104

GRAVY (calculated)

-0.236

Length

256 amino acids

Sequence
(BLAST)

001: MGSVPVGDLG FLRGFPNGLG FGFGSDSSSS STVLDLERRE FVKAPSRLGG KKEGGGVVDA KTALALKSHS EAERRRRERI NHHLAVLRSM IPCADKLDKA
101: ALLTQVINHV KKLKKNAAEI SEGYTIPSDV DEVRVEVEGD ATKSGSFIVK ASLCCEEGPE ILTDLRQTLQ SLHLKIIRAE ISTLGGRVKN VLVMTSDGSS
201: RAIDKHVLMA TVHQALKSIL DRVNSQVDFL PRTSFSSKRR RISPFESSSS SSSLLY

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.