Factsheet for TraesCS2D01G472000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G494900.1	Wheat	nucleus	90.78	93.36
TraesCS2A01G472300.1	Wheat	nucleus	88.94	91.9
Os08t0477900-00	Rice	nucleus	73.73	71.75
Zm00001d031818_P001	Maize	nucleus	66.36	60.25
EES14023	Sorghum	nucleus	66.36	59.02
TraesCS5D01G252300.1	Wheat	nucleus	56.68	58.85
GSMUA_Achr3P06780_001	Banana	cytosol	47.93	50.73
GSMUA_Achr9P15140_001	Banana	plastid	48.39	45.65
VIT_18s0001g07410.t01	Wine grape	nucleus	37.79	37.1
CDX90384	Canola	cytosol	26.27	34.97
KRH16843	Soybean	cytosol	35.02	31.67
PGSC0003DMT400060615	Potato	cytosol	32.26	31.25
TraesCS1D01G112000.1	Wheat	plastid	29.95	30.81
KRH72457	Soybean	nucleus	35.94	30.71
TraesCS3D01G104800.1	Wheat	cytosol	24.42	30.46
PGSC0003DMT400024185	Potato	nucleus	27.19	28.92
Solyc04g076240.1.1	Tomato	nucleus	26.73	28.29
TraesCS3D01G144700.1	Wheat	nucleus	32.72	27.84
Bra010635.1-P	Field mustard	plastid	27.19	26.34
Solyc04g014360.2.1	Tomato	nucleus	32.26	25.83
TraesCS5D01G479100.1	Wheat	nucleus	29.49	25.5
TraesCS3D01G105100.2	Wheat	mitochondrion, nucleus	32.26	25.0
KRH69661	Soybean	mitochondrion	24.42	25.0
AT4G38070.1	Thale cress	plastid	27.65	23.44
TraesCS5D01G237300.1	Wheat	nucleus	35.94	23.15
TraesCS4D01G217700.1	Wheat	nucleus	34.1	18.23
CDY52514	Canola	cytosol	27.19	4.1

Protein Annotations

EnsemblPlants:TraesCS2D01G472000.1	EnsemblPlantsGene:TraesCS2D01G472000	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF120	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:575769827..575770610

Molecular Weight (calculated)

23622.0 Da

IEP (calculated)

8.242

GRAVY (calculated)

-0.448

Length

217 amino acids

Sequence
(BLAST)

001: MATDGECSTP GKGATVRSHS EAERKRRQRI NAHLATLRTL VPSASRMDKA ALLGEVVRHV RELQGRANDA TEGVVDVVPG ETDEVGVEED DCLLNRGPTH
101: DVDDDDPRWR RRVRAWVCCA DRPGLMSDLA RAVRSVGSAR PVRAEIATVG GRTRNVLELD HICHEAGPAS NRAVALSTLR AALRTVLLNR EELLAAAATT
201: TVEGYKRPRL SPVQQLS

Best Arabidopsis Sequence Match ( AT4G38070.1 )
(BLAST)

001: MVLLHHVSLS HYQNSSSLFS SSSESILCLF LVLCVMQLEQ GMRPISRCYN PTAYSTTMGR SFFAGAATSS KLFSRGFSVT KPKSKTESKE VAAKKHSDAE
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ

Arabidopsis Description

BHLH131Transcription factor bHLH131 [Source:UniProtKB/Swiss-Prot;Acc:P0CB25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.