CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72457	Soybean	nucleus	87.92	83.07
VIT_18s0001g07410.t01	Wine grape	nucleus	48.33	52.49
TraesCS5A01G245600.1	Wheat	nucleus	34.17	42.49
PGSC0003DMT400024185	Potato	nucleus	35.83	42.16
Solyc04g076240.1.1	Tomato	nucleus	35.83	41.95
TraesCS5B01G243000.1	Wheat	nucleus	35.42	40.67
TraesCS5D01G252300.1	Wheat	nucleus	35.0	40.19
GSMUA_Achr3P06780_001	Banana	cytosol	34.17	40.0
HORVU5Hr1G069580.1	Barley	nucleus	33.75	38.57
TraesCS2B01G494900.1	Wheat	nucleus	32.92	37.44
Zm00001d005919_P001	Maize	nucleus	33.33	37.38
Os08t0477900-00	Rice	nucleus	34.58	37.22
TraesCS2A01G472300.1	Wheat	nucleus	32.5	37.14
EER96881	Sorghum	cytosol, nucleus, peroxisome, plastid	34.58	36.89
Zm00001d020763_P001	Maize	nucleus	35.0	36.84
GSMUA_Achr9P15140_001	Banana	plastid	34.58	36.09
TraesCS2D01G472000.1	Wheat	nucleus	31.67	35.02
Zm00001d031818_P001	Maize	nucleus	34.58	34.73
EES14023	Sorghum	nucleus	33.75	33.2
KRH69661	Soybean	mitochondrion	27.08	30.66
KRH22294	Soybean	nucleus	30.42	29.32
KRH54953	Soybean	nucleus	30.83	29.25
KRH27035	Soybean	nucleus	29.58	28.51
KRH25720	Soybean	extracellular, nucleus	30.42	28.29
KRG95083	Soybean	nucleus	29.58	28.29
KRH66750	Soybean	plastid	28.75	27.71
KRH55806	Soybean	nucleus	29.58	27.41
KRH14931	Soybean	nucleus, plastid	30.0	27.27
KRH71297	Soybean	nucleus	29.17	25.83
KRG97707	Soybean	nucleus	29.58	25.82
KRH31167	Soybean	nucleus	29.17	25.0
KRH50172	Soybean	nucleus	27.92	24.54
KRH73206	Soybean	golgi, nucleus	30.0	24.49
KRG92013	Soybean	nucleus	32.92	22.77
KRH34774	Soybean	nucleus	32.92	22.38
KRH70619	Soybean	nucleus	34.58	22.31
KRH75497	Soybean	nucleus	34.58	22.07

Protein Annotations

EntrezGene:100782838	MapMan:15.5.32	Gene3D:4.10.280.10	EMBL:ACUP02009023	EnsemblPlantsGene:GLYMA_14G181500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
UniProt:K7M7S9	EnsemblPlants:KRH16843	ProteinID:KRH16843	ProteinID:KRH16843.1	PFAM:PF00010	PFscan:PS50888
PANTHER:PTHR12565	PANTHER:PTHR12565:SF307	SMART:SM00353	SUPFAM:SSF47459	SUPFAM:SSF55021	UniParc:UPI000233BF64
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:44432316..44433761

Molecular Weight (calculated)

26826.7 Da

IEP (calculated)

9.226

GRAVY (calculated)

-0.645

Length

240 amino acids

Sequence
(BLAST)

001: MVPFRRFYGF ERWLDHHAAH SPMELNAARS KTERKSTEAC KSHREAERRR RQRINSHLST LRSLLPNAAK SDKASLLGEV VEHVKRLRKQ ADDVARGDSS
101: SSSRSAQPGS VRSEAWPFPG ECDEATVSFC DGGEPKRVKA TVCCEDRAGL NRDVGQVIRS VRAKPVRAET MTVGGRTKSV VVVEWEKEEE VGELERALRA
201: VVENRALVGF GMGHVFVGQK RGRDCCEVDS DFLLRNGSFC

Best Arabidopsis Sequence Match ( AT1G68810.1 )
(BLAST)

001: MCAKKEEEEE EEEDSSEAMN NIQNYQNDLF FHQLISHHHH HHHDPSQSET LGASGNVGSG FTIFSQDSVS PIWSLPPPTS IQPPFDQFPP PSSSPASFYG
101: SFFNRSRAHH QGLQFGYEGF GGATSAAHHH HEQLRILSEA LGPVVQAGSG PFGLQAELGK MTAQEIMDAK ALAASKSHSE AERRRRERIN NHLAKLRSIL
201: PNTTKTDKAS LLAEVIQHVK ELKRETSVIS ETNLVPTESD ELTVAFTEEE ETGDGRFVIK ASLCCEDRSD LLPDMIKTLK AMRLKTLKAE ITTVGGRVKN
301: VLFVTGEESS GEEVEEEYCI GTIEEALKAV MEKSNVEESS SSGNAKRQRM SSHNTITIVE QQQQYNQR

Arabidopsis Description

BHLH30Transcription factor bHLH30 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.