Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95083 | Soybean | nucleus | 67.19 | 67.73 |
| KRH66750 | Soybean | plastid | 65.61 | 66.67 |
| CDY23874 | Canola | nucleus | 54.15 | 57.81 |
| VIT_08s0040g01240.t01 | Wine grape | nucleus | 54.55 | 57.74 |
| CDY22504 | Canola | nucleus | 54.15 | 56.38 |
| AT2G41130.1 | Thale cress | nucleus | 55.73 | 55.73 |
| CDX79957 | Canola | nucleus | 54.94 | 55.6 |
| AT3G56770.1 | Thale cress | nucleus | 50.2 | 55.22 |
| Bra004599.1-P | Field mustard | nucleus | 54.55 | 55.2 |
| Bra016951.1-P | Field mustard | nucleus | 54.94 | 54.72 |
| CDY06944 | Canola | nucleus | 54.94 | 54.72 |
| CDY57584 | Canola | nucleus | 54.94 | 54.72 |
| Bra014672.1-P | Field mustard | nucleus | 47.43 | 51.72 |
| CDX76011 | Canola | nucleus | 47.43 | 51.72 |
| PGSC0003DMT400021599 | Potato | nucleus | 50.99 | 49.24 |
| GSMUA_Achr8P23980_001 | Banana | nucleus | 43.48 | 48.46 |
| Solyc10g078380.1.1 | Tomato | nucleus | 49.41 | 47.89 |
| Zm00001d034596_P001 | Maize | nucleus | 42.29 | 46.72 |
| TraesCS5D01G479100.1 | Wheat | nucleus | 43.87 | 44.22 |
| TraesCS5A01G466300.1 | Wheat | plastid | 43.48 | 44.0 |
| TraesCS5B01G478000.1 | Wheat | nucleus | 43.48 | 43.82 |
| Os03t0811400-00 | Rice | nucleus | 45.45 | 42.91 |
| EER93220 | Sorghum | nucleus | 43.48 | 41.2 |
| GSMUA_Achr7P21370_001 | Banana | nucleus | 40.32 | 34.69 |
| KRH72457 | Soybean | nucleus | 31.23 | 31.1 |
| KRH16843 | Soybean | cytosol | 29.25 | 30.83 |
| KRG92013 | Soybean | nucleus | 41.9 | 30.55 |
| KRH34774 | Soybean | nucleus | 42.29 | 30.31 |
| KRH14931 | Soybean | nucleus, plastid | 31.62 | 30.3 |
| KRH75497 | Soybean | nucleus | 41.9 | 28.19 |
| KRH22294 | Soybean | nucleus | 27.67 | 28.11 |
| KRG97707 | Soybean | nucleus | 30.43 | 28.0 |
| KRH70619 | Soybean | nucleus | 41.11 | 27.96 |
| KRH73206 | Soybean | golgi, nucleus | 32.02 | 27.55 |
| KRH27035 | Soybean | nucleus | 26.88 | 27.31 |
| KRH31167 | Soybean | nucleus | 30.04 | 27.14 |
| KRH69661 | Soybean | mitochondrion | 22.53 | 26.89 |
| KRH50172 | Soybean | nucleus | 28.85 | 26.74 |
| KRH71297 | Soybean | nucleus | 28.46 | 26.57 |
| KRH25720 | Soybean | extracellular, nucleus | 26.09 | 25.58 |
| KRH55806 | Soybean | nucleus | 26.09 | 25.48 |
Protein Annotations
| EntrezGene:100790009 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02003642 | ncoils:Coil | EnsemblPlantsGene:GLYMA_06G221200 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:K7K8S9 | EnsemblPlants:KRH54953 | ProteinID:KRH54953 | ProteinID:KRH54953.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF158 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00023BD7EA |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:27159915..27162001
Molecular Weight (calculated)
28461.4 Da
IEP (calculated)
7.328
GRAVY (calculated)
-0.647
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHRQIEMEN SELFQFLTNT NDAFFNTASY GLPAAPAAST MQHSFSGSFS YYPLEASHDH HAPSHEDKAL AALRNHKEAE KRRRERINSH LDKLRTLLPC
101: NSKTDKASLL AKVVQRVREL KQQISSLSDS EAFPSETDEV SVLSTSGDND DHGGCDDNDG RLIFKASLCC EDRSDLIPEL IEILRSLRLK TLKAEMATLG
201: GRTRNVLVVA TDKDHSGESI QFLQNSLKSL VERSSNSNDR SKRRRVLDRK FIA
101: NSKTDKASLL AKVVQRVREL KQQISSLSDS EAFPSETDEV SVLSTSGDND DHGGCDDNDG RLIFKASLCC EDRSDLIPEL IEILRSLRLK TLKAEMATLG
201: GRTRNVLVVA TDKDHSGESI QFLQNSLKSL VERSSNSNDR SKRRRVLDRK FIA
001: MQPETSDQML YSFLAGNEVG GGGYCVSGDY MTTMQSLCGS SSSTSSYYPL AISGIGETMA QDRALAALRN HKEAERRRRE RINSHLNKLR NVLSCNSKTD
101: KATLLAKVVQ RVRELKQQTL ETSDSDQTLL PSETDEISVL HFGDYSNDGH IIFKASLCCE DRSDLLPDLM EILKSLNMKT LRAEMVTIGG RTRSVLVVAA
201: DKEMHGVESV HFLQNALKSL LERSSKSLME RSSGGGGGER SKRRRALDHI IMV
101: KATLLAKVVQ RVRELKQQTL ETSDSDQTLL PSETDEISVL HFGDYSNDGH IIFKASLCCE DRSDLLPDLM EILKSLNMKT LRAEMVTIGG RTRSVLVVAA
201: DKEMHGVESV HFLQNALKSL LERSSKSLME RSSGGGGGER SKRRRALDHI IMV
Arabidopsis Description
BHLH106Transcription factor bHLH106 [Source:UniProtKB/Swiss-Prot;Acc:O80674]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.