Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66750 | Soybean | plastid | 92.43 | 93.17 |
| KRH54953 | Soybean | nucleus | 67.73 | 67.19 |
| CDY23874 | Canola | nucleus | 57.37 | 60.76 |
| VIT_08s0040g01240.t01 | Wine grape | nucleus | 55.78 | 58.58 |
| CDY22504 | Canola | nucleus | 56.18 | 58.02 |
| CDX79957 | Canola | nucleus | 57.37 | 57.6 |
| Bra004599.1-P | Field mustard | nucleus | 56.97 | 57.2 |
| Bra016951.1-P | Field mustard | nucleus | 57.37 | 56.69 |
| CDY06944 | Canola | nucleus | 57.37 | 56.69 |
| CDY57584 | Canola | nucleus | 57.37 | 56.69 |
| AT2G41130.1 | Thale cress | nucleus | 56.18 | 55.73 |
| AT3G56770.1 | Thale cress | nucleus | 49.8 | 54.35 |
| Bra014672.1-P | Field mustard | nucleus | 46.61 | 50.43 |
| CDX76011 | Canola | nucleus | 46.61 | 50.43 |
| Solyc10g078380.1.1 | Tomato | nucleus | 49.8 | 47.89 |
| PGSC0003DMT400021599 | Potato | nucleus | 49.8 | 47.71 |
| GSMUA_Achr8P23980_001 | Banana | nucleus | 43.03 | 47.58 |
| Zm00001d034596_P001 | Maize | nucleus | 39.84 | 43.67 |
| TraesCS5D01G479100.1 | Wheat | nucleus | 42.63 | 42.63 |
| TraesCS5A01G466300.1 | Wheat | plastid | 42.23 | 42.4 |
| TraesCS5B01G478000.1 | Wheat | nucleus | 42.23 | 42.23 |
| Os03t0811400-00 | Rice | nucleus | 42.63 | 39.93 |
| EER93220 | Sorghum | nucleus | 41.83 | 39.33 |
| GSMUA_Achr7P21370_001 | Banana | nucleus | 41.83 | 35.71 |
| KRH22294 | Soybean | nucleus | 31.47 | 31.73 |
| KRH27035 | Soybean | nucleus | 30.68 | 30.92 |
| KRG92013 | Soybean | nucleus | 41.83 | 30.26 |
| KRH34774 | Soybean | nucleus | 41.83 | 29.75 |
| KRH16843 | Soybean | cytosol | 28.29 | 29.58 |
| KRH72457 | Soybean | nucleus | 29.48 | 29.13 |
| KRH50172 | Soybean | nucleus | 31.47 | 28.94 |
| KRH14931 | Soybean | nucleus, plastid | 30.28 | 28.79 |
| KRH75497 | Soybean | nucleus | 43.03 | 28.72 |
| KRH70619 | Soybean | nucleus | 42.23 | 28.49 |
| KRH55806 | Soybean | nucleus | 29.08 | 28.19 |
| KRH69661 | Soybean | mitochondrion | 23.51 | 27.83 |
| KRH25720 | Soybean | extracellular, nucleus | 28.29 | 27.52 |
| KRH71297 | Soybean | nucleus | 29.48 | 27.31 |
| KRG97707 | Soybean | nucleus | 28.29 | 25.82 |
| KRH73206 | Soybean | golgi, nucleus | 29.88 | 25.51 |
| KRH31167 | Soybean | nucleus | 28.29 | 25.36 |
Protein Annotations
| EntrezGene:100802566 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02012077 | EnsemblPlantsGene:GLYMA_19G128900 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1N8Q5 | InterPro:IPR011598 |
| InterPro:IPR036638 | EnsemblPlants:KRG95083 | ProteinID:KRG95083 | ProteinID:KRG95083.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF158 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000233E5EB | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:38818761..38821094
Molecular Weight (calculated)
28251.5 Da
IEP (calculated)
8.869
GRAVY (calculated)
-0.626
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHFAMDNSH LLQFLPNTTT TTTTTNTPFF HAAPHTHTMH HPLSTNSSNN TNYYPFHLSQ ITETPSHHDR ALAAMKNHKE AEKRRRERIN SHLDHLRTLL
101: PCNSKTDKAS LLAKVVQRVK ELKQQTSEIT ELETVPSETD EITVLSTTGG DYASGGGDGR LIFKASLCCE DRSDLIPDLI EILNSLHLKT LKAEMATLGG
201: RTRNVLVVAA DKEHSIESIH FLQNSLRSIL DRSSSGDRSK RRRGLDRRLM S
101: PCNSKTDKAS LLAKVVQRVK ELKQQTSEIT ELETVPSETD EITVLSTTGG DYASGGGDGR LIFKASLCCE DRSDLIPDLI EILNSLHLKT LKAEMATLGG
201: RTRNVLVVAA DKEHSIESIH FLQNSLRSIL DRSSSGDRSK RRRGLDRRLM S
001: MQPETSDQML YSFLAGNEVG GGGYCVSGDY MTTMQSLCGS SSSTSSYYPL AISGIGETMA QDRALAALRN HKEAERRRRE RINSHLNKLR NVLSCNSKTD
101: KATLLAKVVQ RVRELKQQTL ETSDSDQTLL PSETDEISVL HFGDYSNDGH IIFKASLCCE DRSDLLPDLM EILKSLNMKT LRAEMVTIGG RTRSVLVVAA
201: DKEMHGVESV HFLQNALKSL LERSSKSLME RSSGGGGGER SKRRRALDHI IMV
101: KATLLAKVVQ RVRELKQQTL ETSDSDQTLL PSETDEISVL HFGDYSNDGH IIFKASLCCE DRSDLLPDLM EILKSLNMKT LRAEMVTIGG RTRSVLVVAA
201: DKEMHGVESV HFLQNALKSL LERSSKSLME RSSGGGGGER SKRRRALDHI IMV
Arabidopsis Description
BHLH106Transcription factor bHLH106 [Source:UniProtKB/Swiss-Prot;Acc:O80674]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.