CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95083	Soybean	nucleus	93.17	92.43
KRH54953	Soybean	nucleus	66.67	65.61
CDY23874	Canola	nucleus	57.83	60.76
VIT_08s0040g01240.t01	Wine grape	nucleus	57.83	60.25
CDY22504	Canola	nucleus	57.03	58.44
CDX79957	Canola	nucleus	57.83	57.6
Bra004599.1-P	Field mustard	nucleus	57.43	57.2
Bra016951.1-P	Field mustard	nucleus	57.83	56.69
CDY06944	Canola	nucleus	57.83	56.69
CDY57584	Canola	nucleus	57.83	56.69
AT2G41130.1	Thale cress	nucleus	56.63	55.73
AT3G56770.1	Thale cress	nucleus	50.6	54.78
Bra014672.1-P	Field mustard	nucleus	47.39	50.86
CDX76011	Canola	nucleus	47.39	50.86
GSMUA_Achr8P23980_001	Banana	nucleus	44.58	48.9
Solyc10g078380.1.1	Tomato	nucleus	49.0	46.74
PGSC0003DMT400021599	Potato	nucleus	49.0	46.56
Zm00001d034596_P001	Maize	nucleus	40.16	43.67
TraesCS5D01G479100.1	Wheat	nucleus	42.97	42.63
TraesCS5A01G466300.1	Wheat	plastid	42.57	42.4
TraesCS5B01G478000.1	Wheat	nucleus	42.57	42.23
Os03t0811400-00	Rice	nucleus	42.97	39.93
EER93220	Sorghum	nucleus	42.17	39.33
GSMUA_Achr7P21370_001	Banana	nucleus	42.97	36.39
KRH22294	Soybean	nucleus	31.33	31.33
KRG92013	Soybean	nucleus	43.37	31.12
KRH27035	Soybean	nucleus	30.52	30.52
KRH34774	Soybean	nucleus	42.97	30.31
KRH75497	Soybean	nucleus	44.18	29.26
KRH14931	Soybean	nucleus, plastid	30.92	29.17
KRH72457	Soybean	nucleus	29.72	29.13
KRH70619	Soybean	nucleus	43.37	29.03
KRH16843	Soybean	cytosol	27.71	28.75
KRH55806	Soybean	nucleus	29.72	28.57
KRH50172	Soybean	nucleus	30.92	28.21
KRH25720	Soybean	extracellular, nucleus	28.92	27.91
KRH69661	Soybean	mitochondrion	23.29	27.36
KRH71297	Soybean	nucleus	28.92	26.57
KRG97707	Soybean	nucleus	28.92	26.18
KRH73206	Soybean	golgi, nucleus	30.52	25.85
KRH31167	Soybean	nucleus	28.92	25.71

Protein Annotations

EntrezGene:100794930	MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A0R0KI95	EMBL:ACUP02002008	EnsemblPlantsGene:GLYMA_03G126100
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	EnsemblPlants:KRH66750	ProteinID:KRH66750	ProteinID:KRH66750.1	PFAM:PF00010	PFscan:PS50888
PANTHER:PTHR12565	PANTHER:PTHR12565:SF158	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000233799C	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:33996761..33998438

Molecular Weight (calculated)

27964.0 Da

IEP (calculated)

8.530

GRAVY (calculated)

-0.618

Length

249 amino acids

Sequence
(BLAST)

001: MHHFAFAMDN SHLLQFLPNT TTSTNNTPFF HHAPPHTHST FSTNSSNNTS SYPFHLSQIT ETPSHHDRAL AAMKNHKEAE KRRRERINSH LDQLRTLLPC
101: NSKTDKASLL AKVVQRVKEL KQQTSEITEL ETVPSETDEI TVLATTGGDY ASGGDDGRLI FKASLCCEDR SDLIPDLIEI LNSLHLKTLK AEMATLGGRT
201: RNVLIVAADK EHSIESIHFL QNSLKSLLDR SSSGDRSKRR RGLDRRLMS

Best Arabidopsis Sequence Match ( AT2G41130.1 )
(BLAST)

001: MQPETSDQML YSFLAGNEVG GGGYCVSGDY MTTMQSLCGS SSSTSSYYPL AISGIGETMA QDRALAALRN HKEAERRRRE RINSHLNKLR NVLSCNSKTD
101: KATLLAKVVQ RVRELKQQTL ETSDSDQTLL PSETDEISVL HFGDYSNDGH IIFKASLCCE DRSDLLPDLM EILKSLNMKT LRAEMVTIGG RTRSVLVVAA
201: DKEMHGVESV HFLQNALKSL LERSSKSLME RSSGGGGGER SKRRRALDHI IMV

Arabidopsis Description

BHLH106Transcription factor bHLH106 [Source:UniProtKB/Swiss-Prot;Acc:O80674]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.