Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EER93220 | Sorghum | nucleus | 92.58 | 79.4 |
TraesCS5A01G466300.1 | Wheat | plastid | 79.04 | 72.4 |
TraesCS5D01G479100.1 | Wheat | nucleus | 78.6 | 71.71 |
TraesCS5B01G478000.1 | Wheat | nucleus | 78.17 | 71.31 |
Os03t0811400-00 | Rice | nucleus | 83.41 | 71.27 |
GSMUA_Achr8P23980_001 | Banana | nucleus | 52.4 | 52.86 |
KRH54953 | Soybean | nucleus | 46.72 | 42.29 |
CDY23874 | Canola | nucleus | 43.23 | 41.77 |
CDY22504 | Canola | nucleus | 42.79 | 40.33 |
KRH66750 | Soybean | plastid | 43.67 | 40.16 |
KRG95083 | Soybean | nucleus | 43.67 | 39.84 |
GSMUA_Achr7P21370_001 | Banana | nucleus | 51.09 | 39.8 |
CDX79957 | Canola | nucleus | 43.23 | 39.6 |
Bra004599.1-P | Field mustard | nucleus | 42.79 | 39.2 |
AT2G41130.1 | Thale cress | nucleus | 42.79 | 38.74 |
CDY57584 | Canola | nucleus | 42.36 | 38.19 |
CDY06944 | Canola | nucleus | 42.36 | 38.19 |
Bra016951.1-P | Field mustard | nucleus | 42.36 | 38.19 |
VIT_08s0040g01240.t01 | Wine grape | nucleus | 39.3 | 37.66 |
AT3G56770.1 | Thale cress | nucleus | 36.24 | 36.09 |
PGSC0003DMT400021599 | Potato | nucleus | 40.61 | 35.5 |
Solyc10g078380.1.1 | Tomato | nucleus | 39.74 | 34.87 |
CDX76011 | Canola | nucleus | 34.5 | 34.05 |
Bra014672.1-P | Field mustard | nucleus | 34.5 | 34.05 |
Zm00001d005919_P001 | Maize | nucleus | 26.64 | 28.5 |
Zm00001d020763_P001 | Maize | nucleus | 26.64 | 26.75 |
Zm00001d031818_P001 | Maize | nucleus | 27.51 | 26.36 |
Zm00001d037528_P001 | Maize | plastid | 29.26 | 24.63 |
Zm00001d039764_P001 | Maize | nucleus | 27.95 | 24.52 |
Zm00001d028504_P001 | Maize | nucleus | 40.17 | 23.53 |
Zm00001d050394_P001 | Maize | nucleus | 37.55 | 23.24 |
Zm00001d005740_P001 | Maize | nucleus | 34.93 | 22.99 |
Zm00001d032213_P001 | Maize | nucleus | 34.06 | 22.1 |
Zm00001d047878_P001 | Maize | nucleus | 37.55 | 20.14 |
Protein Annotations
EnsemblPlants:Zm00001d034596_P001 | EnsemblPlants:Zm00001d034596_T001 | EnsemblPlantsGene:Zm00001d034596 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR036638 | ncoils:Coil | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF158 |
ProteinID:ONM10732.1 | SEG:seg | SUPFAM:SSF47459 | UniParc:UPI000843DEFC | UniProt:A0A1D6L965 | MapMan:15.5.32 |
Description
bHLH-transcription factor 48DNA binding protein
Coordinates
chr1:+:297421545..297422826
Molecular Weight (calculated)
24042.5 Da
IEP (calculated)
7.637
GRAVY (calculated)
-0.309
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPPFFMGSI WPATAGAAGS EEDEAAAAAA AHDRALAASR NHREAEKRRR ERIKSHLDRL RNIDKASLLA KAVERVRDLK QRAAGVGEAA PAHLFPTEHD
101: EIVVLASGSG AVFEASVCCD DRSDLLPDLI ETLRALRLRT LRSEMATLGG RVRNVLVLAR DVVDGGGGAV AGGDDGYGGR AADSAGGATD GGGGDFLKEA
201: LRALVERPGA AGDRPKRRRV SDMNMQAAA
101: EIVVLASGSG AVFEASVCCD DRSDLLPDLI ETLRALRLRT LRSEMATLGG RVRNVLVLAR DVVDGGGGAV AGGDDGYGGR AADSAGGATD GGGGDFLKEA
201: LRALVERPGA AGDRPKRRRV SDMNMQAAA
001: MQPETSDQML YSFLAGNEVG GGGYCVSGDY MTTMQSLCGS SSSTSSYYPL AISGIGETMA QDRALAALRN HKEAERRRRE RINSHLNKLR NVLSCNSKTD
101: KATLLAKVVQ RVRELKQQTL ETSDSDQTLL PSETDEISVL HFGDYSNDGH IIFKASLCCE DRSDLLPDLM EILKSLNMKT LRAEMVTIGG RTRSVLVVAA
201: DKEMHGVESV HFLQNALKSL LERSSKSLME RSSGGGGGER SKRRRALDHI IMV
101: KATLLAKVVQ RVRELKQQTL ETSDSDQTLL PSETDEISVL HFGDYSNDGH IIFKASLCCE DRSDLLPDLM EILKSLNMKT LRAEMVTIGG RTRSVLVVAA
201: DKEMHGVESV HFLQNALKSL LERSSKSLME RSSGGGGGER SKRRRALDHI IMV
Arabidopsis Description
BHLH106Transcription factor bHLH106 [Source:UniProtKB/Swiss-Prot;Acc:O80674]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.