Skip to main content
crop-pal logo
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER93220 Sorghum nucleus 92.58 79.4
TraesCS5A01G466300.1 Wheat plastid 79.04 72.4
TraesCS5D01G479100.1 Wheat nucleus 78.6 71.71
TraesCS5B01G478000.1 Wheat nucleus 78.17 71.31
Os03t0811400-00 Rice nucleus 83.41 71.27
GSMUA_Achr8P23980_001 Banana nucleus 52.4 52.86
KRH54953 Soybean nucleus 46.72 42.29
CDY23874 Canola nucleus 43.23 41.77
CDY22504 Canola nucleus 42.79 40.33
KRH66750 Soybean plastid 43.67 40.16
KRG95083 Soybean nucleus 43.67 39.84
GSMUA_Achr7P21370_001 Banana nucleus 51.09 39.8
CDX79957 Canola nucleus 43.23 39.6
Bra004599.1-P Field mustard nucleus 42.79 39.2
AT2G41130.1 Thale cress nucleus 42.79 38.74
CDY57584 Canola nucleus 42.36 38.19
CDY06944 Canola nucleus 42.36 38.19
Bra016951.1-P Field mustard nucleus 42.36 38.19
VIT_08s0040g01240.t01 Wine grape nucleus 39.3 37.66
AT3G56770.1 Thale cress nucleus 36.24 36.09
PGSC0003DMT400021599 Potato nucleus 40.61 35.5
Solyc10g078380.1.1 Tomato nucleus 39.74 34.87
CDX76011 Canola nucleus 34.5 34.05
Bra014672.1-P Field mustard nucleus 34.5 34.05
Zm00001d005919_P001 Maize nucleus 26.64 28.5
Zm00001d020763_P001 Maize nucleus 26.64 26.75
Zm00001d031818_P001 Maize nucleus 27.51 26.36
Zm00001d037528_P001 Maize plastid 29.26 24.63
Zm00001d039764_P001 Maize nucleus 27.95 24.52
Zm00001d028504_P001 Maize nucleus 40.17 23.53
Zm00001d050394_P001 Maize nucleus 37.55 23.24
Zm00001d005740_P001 Maize nucleus 34.93 22.99
Zm00001d032213_P001 Maize nucleus 34.06 22.1
Zm00001d047878_P001 Maize nucleus 37.55 20.14
Protein Annotations
EnsemblPlants:Zm00001d034596_P001EnsemblPlants:Zm00001d034596_T001EnsemblPlantsGene:Zm00001d034596GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR036638ncoils:CoilPANTHER:PTHR12565PANTHER:PTHR12565:SF158
ProteinID:ONM10732.1SEG:segSUPFAM:SSF47459UniParc:UPI000843DEFCUniProt:A0A1D6L965MapMan:15.5.32
Description
bHLH-transcription factor 48DNA binding protein
Coordinates
chr1:+:297421545..297422826
Molecular Weight (calculated)
24042.5 Da
IEP (calculated)
7.637
GRAVY (calculated)
-0.309
Length
229 amino acids
Sequence
(BLAST)
001: MLPPFFMGSI WPATAGAAGS EEDEAAAAAA AHDRALAASR NHREAEKRRR ERIKSHLDRL RNIDKASLLA KAVERVRDLK QRAAGVGEAA PAHLFPTEHD
101: EIVVLASGSG AVFEASVCCD DRSDLLPDLI ETLRALRLRT LRSEMATLGG RVRNVLVLAR DVVDGGGGAV AGGDDGYGGR AADSAGGATD GGGGDFLKEA
201: LRALVERPGA AGDRPKRRRV SDMNMQAAA
Best Arabidopsis Sequence Match ( AT2G41130.1 )
(BLAST)
001: MQPETSDQML YSFLAGNEVG GGGYCVSGDY MTTMQSLCGS SSSTSSYYPL AISGIGETMA QDRALAALRN HKEAERRRRE RINSHLNKLR NVLSCNSKTD
101: KATLLAKVVQ RVRELKQQTL ETSDSDQTLL PSETDEISVL HFGDYSNDGH IIFKASLCCE DRSDLLPDLM EILKSLNMKT LRAEMVTIGG RTRSVLVVAA
201: DKEMHGVESV HFLQNALKSL LERSSKSLME RSSGGGGGER SKRRRALDHI IMV
Arabidopsis Description
BHLH106Transcription factor bHLH106 [Source:UniProtKB/Swiss-Prot;Acc:O80674]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.