Factsheet for HORVU4Hr1G031620.11

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G009800.5	cytosol
HORVU4Hr1G055900.5	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G34760.1	HORVU4Hr1G055900.5	AT5G58550.1	23512855
AT1G34760.1	HORVU4Hr1G009800.5	AT5G65800.1	23512855

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G148900.2	Wheat	cytosol	81.11	87.95
TraesCS4A01G167100.1	Wheat	cytosol	71.48	79.1
EES10091	Sorghum	cytosol	70.37	76.92
Os11t0609600-01	Rice	cytosol	42.96	58.0
GSMUA_Achr2P22240_001	Banana	cytosol	54.07	56.81
CDY38227	Canola	cytosol	52.96	56.52
CDY69181	Canola	cytosol	52.59	56.13
Bra031383.1-P	Field mustard	cytosol	52.59	56.13
AT1G22300.1	Thale cress	cytosol	52.59	55.91
VIT_18s0001g05720.t01	Wine grape	cytosol	51.48	55.16
PGSC0003DMT400016422	Potato	cytosol	51.11	54.76
AT1G34760.1	Thale cress	cytosol	50.37	53.33
Solyc04g074230.2.1	Tomato	extracellular	51.11	51.88
HORVU4Hr1G007370.1	Barley	plasma membrane	47.41	49.04
HORVU2Hr1G080630.1	Barley	cytosol	46.3	47.53
CDY48771	Canola	cytosol	31.11	46.15
HORVU0Hr1G004990.4	Barley	cytosol	39.26	44.35
Zm00001d048868_P002	Maize	extracellular	69.26	43.59
CDX91673	Canola	cytosol	43.33	43.49
HORVU4Hr1G043300.1	Barley	cytosol	46.3	41.67
AT1G22290.2	Thale cress	cytosol	29.26	36.57
HORVU4Hr1G031770.1	Barley	cytosol, plastid	19.63	30.99
CDY03135	Canola	cytosol	44.81	30.71

Protein Annotations

EnsemblPlants:HORVU4Hr1G031620.11	EnsemblPlantsGene:HORVU4Hr1G031620	Gene3D:1.20.190.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0019904	InterPro:14-3-3	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	InterPro:IPR036815	PANTHER:PTHR18860
PANTHER:PTHR18860:SF58	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	SMART:SM00101	SUPFAM:SSF48445
UniParc:UPI000B485CE1	UniProt:A0A287NQR0	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:209297983..209350951

Molecular Weight (calculated)

30900.4 Da

IEP (calculated)

8.129

GRAVY (calculated)

-0.230

Length

270 amino acids

Sequence
(BLAST)

001: MEERGKVVCM AKLAEQAERY DDMVDFMKKL ARMDVDMSAE ERHLFSVGFK NTIGARRASW RILSSLEQKV TKGEQAGQMI SVYRKRVEDE LRMVCNEILS
101: IIAIHCLPLA NTGENVVFFY KMKGDYYRYL AEFSTGTEKK SAADQSLMAY QHAMVVASTE LSPAHPVRLG LALNFSVFFY EIMNCHQRAC QVARQAFDEA
201: TTEINSAGMD GHNDSTLMMQ LLNDNLALWT KSWSLLFWQV KPRRTATSIW RDNWNVLKAP KHACVQITIT

Best Arabidopsis Sequence Match ( AT1G22300.1 )
(BLAST)

001: MENEREKQVY LAKLSEQTER YDEMVEAMKK VAQLDVELTV EERNLVSVGY KNVIGARRAS WRILSSIEQK EESKGNDENV KRLKNYRKRV EDELAKVCND
101: ILSVIDKHLI PSSNAVESTV FFYKMKGDYY RYLAEFSSGA ERKEAADQSL EAYKAAVAAA ENGLAPTHPV RLGLALNFSV FYYEILNSPE SACQLAKQAF
201: DDAIAELDSL NEESYKDSTL IMQLLRDNLT LWTSDLNEEG DERTKGADEP QDEN

Arabidopsis Description

GRF10GRF10 [Source:UniProtKB/TrEMBL;Acc:A0A178W0Z4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.