Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g05720.t01 | Wine grape | cytosol | 80.78 | 81.75 |
| PGSC0003DMT400016422 | Potato | cytosol | 80.0 | 80.95 |
| AT1G22300.1 | Thale cress | cytosol | 76.86 | 77.17 |
| Solyc04g074230.2.1 | Tomato | extracellular | 78.43 | 75.19 |
| AT1G26480.1 | Thale cress | cytosol | 75.69 | 72.01 |
| AT5G38480.1 | Thale cress | cytosol | 68.24 | 68.24 |
| GSMUA_Achr2P22240_001 | Banana | cytosol | 67.84 | 67.32 |
| AT2G42590.3 | Thale cress | cytosol | 72.16 | 66.67 |
| AT3G02520.2 | Thale cress | cytosol | 67.45 | 64.91 |
| AT1G78300.1 | Thale cress | cytosol | 65.1 | 64.09 |
| AT5G16050.2 | Thale cress | cytosol | 65.88 | 62.69 |
| AT5G65430.3 | Thale cress | cytosol | 62.75 | 61.54 |
| AT1G35160.2 | Thale cress | cytosol | 67.06 | 57.97 |
| EES10091 | Sorghum | cytosol | 54.51 | 56.28 |
| TraesCS4B01G148900.2 | Wheat | cytosol | 54.9 | 56.22 |
| AT5G10450.4 | Thale cress | cytosol | 60.0 | 56.04 |
| AT4G09000.2 | Thale cress | cytosol | 66.67 | 53.46 |
| CDY03135 | Canola | cytosol | 81.57 | 52.79 |
| TraesCS4A01G167100.1 | Wheat | cytosol | 49.41 | 51.64 |
| AT1G78220.1 | Thale cress | cytosol | 49.41 | 51.43 |
| HORVU4Hr1G031620.11 | Barley | cytosol | 53.33 | 50.37 |
| AT1G22290.2 | Thale cress | cytosol | 42.35 | 50.0 |
| Os11t0609600-01 | Rice | cytosol | 31.37 | 40.0 |
| AT2G10450.1 | Thale cress | extracellular | 11.37 | 35.37 |
| Zm00001d048868_P002 | Maize | extracellular | 55.69 | 33.1 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| EntrezGene:840380 | ProteinID:AEE31735.1 | ArrayExpress:AT1G34760 | EnsemblPlantsGene:AT1G34760 | RefSeq:AT1G34760 | TAIR:AT1G34760 |
| RefSeq:AT1G34760-TAIR-G | EnsemblPlants:AT1G34760.1 | TAIR:AT1G34760.1 | EMBL:BT029457 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | Symbol:GRF11 | InterPro:IPR036815 | RefSeq:NP_564451.2 |
| PFAM:PF00244 | PIRSF:PIRSF000868 | PO:PO:0000084 | PO:PO:0000256 | PO:PO:0000262 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0025022 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF59 |
| SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI000034F44A | SEG:seg | : | : |
Description
GRF11general regulatory factor 11 [Source:TAIR;Acc:AT1G34760]
Coordinates
chr1:-:12743722..12745748
Molecular Weight (calculated)
29123.2 Da
IEP (calculated)
4.718
GRAVY (calculated)
-0.573
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MENERAKQVY LAKLNEQAER YDEMVEAMKK VAALDVELTI EERNLLSVGY KNVIGARRAS WRILSSIEQK EESKGNEQNA KRIKDYRTKV EEELSKICYD
101: ILAVIDKHLV PFATSGESTV FYYKMKGDYF RYLAEFKSGA DREEAADLSL KAYEAATSSA STELSTTHPI RLGLALNFSV FYYEILNSPE RACHLAKRAF
201: DEAIAELDSL NEDSYKDSTL IMQLLRDNLT LWTSDLEEGG EQSKGHNQQD EVNKI
101: ILAVIDKHLV PFATSGESTV FYYKMKGDYF RYLAEFKSGA DREEAADLSL KAYEAATSSA STELSTTHPI RLGLALNFSV FYYEILNSPE RACHLAKRAF
201: DEAIAELDSL NEDSYKDSTL IMQLLRDNLT LWTSDLEEGG EQSKGHNQQD EVNKI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.