Factsheet for TraesCS4B01G148900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G111500.1	nucleus
TraesCS4A01G256500.1	cytosol
TraesCS4B01G058200.1	cytosol
TraesCS4B01G192300.1	nucleus
TraesCS4D01G058200.1	cytosol
TraesCS4D01G193600.2	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G34760.1	TraesCS4A01G111500.1	AT5G58550.1	23512855
AT1G34760.1	TraesCS4B01G192300.1	AT5G58550.1	23512855
AT1G34760.1	TraesCS4D01G193600.2	AT5G58550.1	23512855
AT1G34760.1	TraesCS4A01G256500.1	AT5G65800.1	23512855
AT1G34760.1	TraesCS4B01G058200.1	AT5G65800.1	23512855
AT1G34760.1	TraesCS4D01G058200.1	AT5G65800.1	23512855

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G167100.1	Wheat	cytosol	81.93	83.61
HORVU4Hr1G031620.11	Barley	cytosol	87.95	81.11
EES10091	Sorghum	cytosol	77.91	78.54
GSMUA_Achr2P22240_001	Banana	cytosol	59.84	57.98
Bra031383.1-P	Field mustard	cytosol	57.83	56.92
CDY69181	Canola	cytosol	57.83	56.92
CDY38227	Canola	cytosol	57.43	56.52
Os11t0609600-01	Rice	cytosol	45.38	56.5
AT1G22300.1	Thale cress	cytosol	57.03	55.91
VIT_18s0001g05720.t01	Wine grape	cytosol	56.22	55.56
PGSC0003DMT400016422	Potato	cytosol	55.82	55.16
AT1G34760.1	Thale cress	cytosol	56.22	54.9
Solyc04g074230.2.1	Tomato	extracellular	55.82	52.26
TraesCS4B01G045500.2	Wheat	cytosol	53.41	50.96
TraesCS7B01G183800.1	Wheat	plastid	52.21	49.81
TraesCS2B01G344600.1	Wheat	golgi	52.21	49.43
CDY48771	Canola	cytosol	35.74	48.9
TraesCS4B01G159900.1	Wheat	cytosol	52.21	47.62
Zm00001d048868_P002	Maize	extracellular	78.31	45.45
TraesCS3B01G068000.1	Wheat	cytosol	51.41	45.39
CDX91673	Canola	cytosol	46.99	43.49
AT1G22290.2	Thale cress	cytosol	30.92	35.65
CDY03135	Canola	cytosol	49.8	31.47

Protein Annotations

EnsemblPlants:TraesCS4B01G148900.2	EnsemblPlantsGene:TraesCS4B01G148900	Gene3D:1.20.190.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0019904	InterPro:14-3-3	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	InterPro:IPR036815	PANTHER:PTHR18860
PANTHER:PTHR18860:SF58	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	SMART:SM00101	SUPFAM:SSF48445
TIGR:cd08774	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:217846267..217854445

Molecular Weight (calculated)

27951.5 Da

IEP (calculated)

4.925

GRAVY (calculated)

-0.222

Length

249 amino acids

Sequence
(BLAST)

001: MEERGKVVCM AKLAEQAGRY DDMVDFMKKL ARMDVDMSVE ERHLFSVGFK NTIGARRASW RILSSLEQKV AAGEQAGRMI SVYRTKVEDE LRMVCNEILS
101: IIAIHCLPLA NAGENVVFFH KMKGDYYRYL AEFSTGVEKK SAADQSLMAY QHAMVVASTE LSPAHPIRLG LALNFSVFFY DIMNCHQRAC QVAKQAFDEA
201: TTEINSAGMD GNNDSTLMMQ LLNDNLALWK SELTEGETSK DSDIDMEEG

Best Arabidopsis Sequence Match ( AT1G22300.1 )
(BLAST)

001: MENEREKQVY LAKLSEQTER YDEMVEAMKK VAQLDVELTV EERNLVSVGY KNVIGARRAS WRILSSIEQK EESKGNDENV KRLKNYRKRV EDELAKVCND
101: ILSVIDKHLI PSSNAVESTV FFYKMKGDYY RYLAEFSSGA ERKEAADQSL EAYKAAVAAA ENGLAPTHPV RLGLALNFSV FYYEILNSPE SACQLAKQAF
201: DDAIAELDSL NEESYKDSTL IMQLLRDNLT LWTSDLNEEG DERTKGADEP QDEN

Arabidopsis Description

GRF10GRF10 [Source:UniProtKB/TrEMBL;Acc:A0A178W0Z4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.