CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025617_P006	Maize	cytosol	99.62	99.62
Os04t0462500-02	Rice	cytosol	97.7	97.33
Zm00001d003401_P003	Maize	cytosol	99.62	95.59
TraesCS2A01G337300.1	Wheat	cytosol	95.4	94.68
TraesCS2B01G344600.1	Wheat	golgi	95.4	94.68
TraesCS2D01G325600.1	Wheat	golgi, plastid	95.4	94.68
HORVU2Hr1G080630.1	Barley	cytosol	95.02	94.3
OQU80487	Sorghum	cytosol	85.82	87.5
EES15274	Sorghum	cytosol	84.29	86.96
HORVU0Hr1G004990.4	Barley	cytosol	73.95	80.75
OQU83613	Sorghum	cytosol	81.61	80.08
EES14338	Sorghum	cytosol	73.95	74.52
EES10091	Sorghum	cytosol	48.28	51.01

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
EntrezGene:8073442	UniProt:C5Y9W4	ncoils:Coil	EnsemblPlants:EES10954	ProteinID:EES10954	ProteinID:EES10954.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815	PFAM:PF00244
PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF36
SMART:SM00101	EnsemblPlantsGene:SORBI_3006G108400	SUPFAM:SSF48445	unigene:Sbi.17817	UniParc:UPI0001A86EB1	RefSeq:XP_002446626.1

Description

hypothetical protein

Coordinates

chr6:+:47785220..47789305

Molecular Weight (calculated)

29650.0 Da

IEP (calculated)

4.459

GRAVY (calculated)

-0.488

Length

261 amino acids

Sequence
(BLAST)

001: MASAELSREE NVYMAKLAEQ AERYEEMVEF MEKVAKTVDS EELTVEERNL LSVAYKNVIG ARRASWRIIS SIEQKEEGRG NEDRVTLIKD YRGKIETELT
101: KICDGILKLL ESHLVPSSTA PESKVFYLKM KGDYYRYLAE FKTGAERKDA AENTMVAYKA AQDIALAELA PTHPIRLGLA LNFSVFYYEI LNSPDRACSL
201: AKQAFDEAIS ELDTLSEESY KDSTLIMQLL RDNLTLWTSD ISEDPAEEIR EAPKRDSSEG Q

Best Arabidopsis Sequence Match ( AT3G02520.2 )
(BLAST)

001: MSSSREENVY LAKLAEQAER YEEMVEFMEK VAKTVDTDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVSIIKDYRG KIETELSKIC
101: DGILNLLDSH LVPTASLAES KVFYLKMKGD YHRYLAEFKT GAERKEAAES TLVAYKSAQD IALADLAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAISELD TLGEESYKDS TLIMQLLRDN LTLWNSDIND EAGGDEIKEA SKHEPEEGKP AETGQ

Arabidopsis Description

GRF714-3-3-like protein GF14 nu [Source:UniProtKB/Swiss-Prot;Acc:Q96300]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.