Factsheet for PGSC0003DMT400033585

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g076060.2.1	Tomato	nucleus	99.21	99.21
KRH62193	Soybean	endoplasmic reticulum	83.73	84.4
KRH52909	Soybean	endoplasmic reticulum	83.33	84.0
PGSC0003DMT400041634	Potato	cytosol	82.94	83.94
GSMUA_Achr3P06740_001	Banana	cytosol	65.87	74.77
PGSC0003DMT400045782	Potato	cytosol	73.41	72.83
PGSC0003DMT400079172	Potato	cytosol	73.41	71.43
PGSC0003DMT400060654	Potato	cytosol	72.22	71.37
PGSC0003DMT400041810	Potato	cytosol	72.22	70.54
PGSC0003DMT400050389	Potato	cytosol	72.62	70.38
PGSC0003DMT400062153	Potato	cytosol	72.62	70.38
TraesCS7A01G295500.1	Wheat	golgi	68.65	66.8
TraesCS7D01G292400.1	Wheat	cytosol	69.05	66.67
TraesCS7B01G183800.1	Wheat	plastid	69.05	66.67
EES14338	Sorghum	cytosol	68.25	66.41
Os08t0480800-01	Rice	plasma membrane	68.65	65.53
Zm00001d052796_P003	Maize	cytosol	67.06	62.83
PGSC0003DMT400016422	Potato	cytosol	62.7	62.7
PGSC0003DMT400052619	Potato	cytosol	61.51	59.39
Zm00001d006462_P001	Maize	cytosol	34.92	59.06
PGSC0003DMT400020200	Potato	cytosol	57.94	56.37
PGSC0003DMT400072941	Potato	cytosol	63.49	56.14

Protein Annotations

Gene3D:1.20.190.20	EntrezGene:102586856	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain
MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0019904
InterPro:IPR036815	EMBL:LC011874	UniProt:M1AZD2	PFAM:PF00244	EnsemblPlantsGene:PGSC0003DMG400012899	PGSC:PGSC0003DMG400012899
EnsemblPlants:PGSC0003DMT400033585	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860
PANTHER:PTHR18860:SF27	SMART:SM00101	SUPFAM:SSF48445	UniParc:UPI0001B71018	RefSeq:XP_006338086.1	:

Description

14-3-3 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012899]

Coordinates

chr4:-:64754692..64759083

Molecular Weight (calculated)

28622.0 Da

IEP (calculated)

4.502

GRAVY (calculated)

-0.357

Length

252 amino acids

Sequence
(BLAST)

001: MAAPIPENLS REQCLYLAKL AEQAERYEEM VQFMDKLVLN STPAGELTVE ERNLLSVAYK NVIGSLRAAW RIVSSIEQKE ESRKNEEHVH LVKEYRGKVE
101: NELSQVCAGI LKLLESNLVP SATTSESKVF YLKMKGDYYR YLAEFKIGDE RKQAAEDTMN SYKAAQEIAL IDLPPTHPIR LGLALNFSVF YFEILNSSDK
201: ACSMAKQAFE EAIAELDTLG EESYKDSTLI MQLLRDNLTL WTSDAQDQLD ES

Best Arabidopsis Sequence Match ( AT5G65430.1 )
(BLAST)

001: MATTLSRDQY VYMAKLAEQA ERYEEMVQFM EQLVSGATPA GELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NEEHVSLVKD YRSKVETELS
101: SICSGILRLL DSHLIPSATA SESKVFYLKM KGDYHRYLAE FKSGDERKTA AEDTMIAYKA AQDVAVADLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA

Arabidopsis Description

GRF8General regulatory factor 8 [Source:UniProtKB/TrEMBL;Acc:F4KHY7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.