Factsheet for PGSC0003DMT400079172

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g074510.2.1	Tomato	extracellular, nucleus	94.98	91.79
PGSC0003DMT400045782	Potato	cytosol	89.96	91.73
GSMUA_Achr6P10320_001	Banana	cytosol	44.79	89.92
PGSC0003DMT400041810	Potato	cytosol	88.03	88.37
PGSC0003DMT400060654	Potato	cytosol	86.87	88.24
GSMUA_Achr10P...	Banana	cytosol	68.73	86.83
PGSC0003DMT400062153	Potato	cytosol	84.17	83.85
PGSC0003DMT400050389	Potato	cytosol	81.85	81.54
PGSC0003DMT400041634	Potato	cytosol	72.59	75.5
PGSC0003DMT400033585	Potato	cytosol	71.43	73.41
PGSC0003DMT400016422	Potato	cytosol	66.02	67.86
PGSC0003DMT400052619	Potato	cytosol	66.8	66.28
PGSC0003DMT400020200	Potato	cytosol	63.71	63.71
PGSC0003DMT400072941	Potato	cytosol	69.88	63.51

Protein Annotations

Gene3D:1.20.190.20	EntrezGene:102582707	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain
MapMan:35.1	ProteinID:CAA72383	ProteinID:CAA72383.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815	RefSeq:NP_001275270.1	UniProt:P93786	PFAM:PF00244
EnsemblPlantsGene:PGSC0003DMG400030814	PGSC:PGSC0003DMG400030814	EnsemblPlants:PGSC0003DMT400079172	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796
ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF26	SMART:SM00101	SUPFAM:SSF48445	UniParc:UPI00000A35D4
EMBL:Y11687	SEG:seg	:	:	:	:

Description

14-3-3 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030814]

Coordinates

chr4:+:64022125..64024235

Molecular Weight (calculated)

29310.4 Da

IEP (calculated)

4.490

GRAVY (calculated)

-0.563

Length

259 amino acids

Sequence
(BLAST)

001: MAVAPTAREE NVYMAKLAEQ AERYEEMVEF MEKVSNSLGS EELTVEERNL LSVAYKNVIG ARRASWRIIS SIEQKEESRG NEEHVNSIRE YRSKIENELS
101: KICDGILKLL DSKLIPSATS GDSKVFYLKM KGDYHRYLAE FKTGAERKEA AESTLTAYKA AQDIASAELA PTHPIRLGLA LNFSVFYYEI LNSPDRACNL
201: AKQAFDEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQDDGADEIK EDPKPEEKN

Best Arabidopsis Sequence Match ( AT1G78300.1 )
(BLAST)

001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ

Arabidopsis Description

GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.