Factsheet for PGSC0003DMT400045782

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g057110.2.1	Tomato	extracellular, nucleus	98.82	98.82
PGSC0003DMT400079172	Potato	cytosol	91.73	89.96
PGSC0003DMT400060654	Potato	cytosol	88.58	88.24
PGSC0003DMT400041810	Potato	cytosol	89.37	87.98
GSMUA_Achr6P10320_001	Banana	cytosol	43.7	86.05
GSMUA_Achr10P...	Banana	cytosol	68.5	84.88
PGSC0003DMT400062153	Potato	cytosol	84.25	82.31
PGSC0003DMT400050389	Potato	cytosol	82.28	80.38
PGSC0003DMT400041634	Potato	cytosol	74.8	76.31
PGSC0003DMT400033585	Potato	cytosol	72.83	73.41
PGSC0003DMT400016422	Potato	cytosol	66.14	66.67
PGSC0003DMT400052619	Potato	cytosol	68.5	66.67
PGSC0003DMT400072941	Potato	cytosol	70.87	63.16
PGSC0003DMT400020200	Potato	cytosol	63.78	62.55

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
EMBL:AB690309	ProteinID:BAM28646	ProteinID:BAM28646.1	ProteinID:CAA72382	ProteinID:CAA72382.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815	UniProt:M1BI71
PFAM:PF00244	EnsemblPlantsGene:PGSC0003DMG400017753	PGSC:PGSC0003DMG400017753	EnsemblPlants:PGSC0003DMT400045782	PIRSF:PIRSF000868	PRINTS:PR00305
ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF26	SMART:SM00101	SUPFAM:SSF48445
UniParc:UPI0002962179	EMBL:Y11686	:	:	:	:

Description

14-3-3 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400017753]

Coordinates

chr12:+:55422278..55424767

Molecular Weight (calculated)

28835.8 Da

IEP (calculated)

4.418

GRAVY (calculated)

-0.571

Length

254 amino acids

Sequence
(BLAST)

001: MAREENVYMA KLAEQAERYE EMVQFMEKVS TSLGSEELTV EERNLLSVAY KNVIGARRAS WRIISSIEQK EESRGNEEHV KCIKEYRSKI ESELSNICDG
101: ILKLLDSNLI PSASNGDSKV FYLKMKGDYH RYLAEFTTGA ERKEAAESTL SAYKAAQDIA NTELAPTHPI RLGLALNFSV FYYEILNSPD RACNLAKQAF
201: DEAIAELDTL GEESYKDSTL IMQLLRDNLT LWTSDMQDDG ADEIKETKPD NEQQ

Best Arabidopsis Sequence Match ( AT1G78300.1 )
(BLAST)

001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ

Arabidopsis Description

GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.