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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, nucleus

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
 extracellular: 22364583
nucleus: 25464976
plastid: 26371478
nucleus: 28394025
extracellular: 29876421
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID: 26371478 doi
M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID: 22364583 doi
P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
msms PMID: 25464976 doi
Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400045782 Potato cytosol 98.82 98.82
Solyc04g012120.2.1 Tomato extracellular, nucleus 88.58 88.24
GSMUA_Achr6P10320_001 Banana cytosol 44.09 86.82
GSMUA_Achr10P... Banana cytosol 68.9 85.37
Solyc04g074510.2.1 Tomato extracellular, nucleus 88.58 83.96
Solyc03g034180.2.1 Tomato cytosol 84.25 82.95
Solyc02g063070.2.1 Tomato plastid 84.25 82.31
Solyc11g010200.1.1 Tomato nucleus 86.22 81.41
Solyc11g010470.1.1 Tomato extracellular, nucleus 75.59 77.11
Solyc04g076060.2.1 Tomato nucleus 73.62 74.21
Solyc07g053260.2.1 Tomato plastid 69.29 67.43
Solyc01g010360.2.1 Tomato cytosol 69.29 64.23
Solyc04g074230.2.1 Tomato extracellular 66.54 63.53
Solyc05g012420.2.1 Tomato unclear 71.26 63.51
Solyc12g010860.1.1 Tomato plastid 64.17 62.45
Protein Annotations
Gene3D:1.20.190.20InterPro:14-3-3InterPro:14-3-3_CSInterPro:14-3-3_dom_sfInterPro:14-3-3_domainMapMan:35.1
ProteinID:CAA65146.2ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0019904
InterPro:IPR036815UniProt:P93208PFAM:PF00244PIRSF:PIRSF000868PRINTS:PR00305ScanProsite:PS00796
ScanProsite:PS00797PANTHER:PTHR18860PANTHER:PTHR18860:SF26SMART:SM00101SUPFAM:SSF48445EnsemblPlantsGene:Solyc12g057110.2
EnsemblPlants:Solyc12g057110.2.1UniParc:UPI0000124DCE::::
Description
TFT214-3-3 protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P93208]
Coordinates
chr12:+:63191706..63194481
Molecular Weight (calculated)
28880.8 Da
IEP (calculated)
4.428
GRAVY (calculated)
-0.591
Length
254 amino acids
Sequence
(BLAST)
001: MAREENVYMA KLAEQAERYE EMVQFMEKVS TSLGSEELTV EERNLLSVAY KNVIGARRAS WRIISSIEQK EESRGNEEHV KCIKEYRSKI ESELSDICDG
101: ILKLLDSNLI PSASNGDSKV FYLKMKGDYH RYLAEFKTGA ERKEAAESTL SAYKAAQDIA NTELAPTHPI RLGLALNFSV FYYEILNSPD RACNLAKQAF
201: DEAIAELDTL GEESYKDSTL IMQLLRDNLT LWTSDMQDDG ADEIKETKND NEQQ
Best Arabidopsis Sequence Match ( AT1G78300.1 )
(BLAST)
001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
Arabidopsis Description
GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.