CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	98.79	98.79
PGSC0003DMT400014862	Potato	cytosol	80.57	89.64
VIT_15s0046g03520.t01	Wine grape	cytosol	89.88	89.16
GSMUA_Achr3P27270_001	Banana	cytosol	31.98	87.78
Solyc08g008670.2.1	Tomato	cytosol, extracellular	89.07	87.3
Solyc05g048760.2.1	Tomato	cytosol	89.07	87.3
PGSC0003DMT400055722	Potato	cytosol	89.07	87.3
GSMUA_Achr9P23680_001	Banana	cytosol	31.17	85.56
Zm00001d001789_P001	Maize	cytosol	86.23	85.54
EES11670	Sorghum	cytosol	86.23	85.54
TraesCS2B01G599300.1	Wheat	golgi	85.02	84.34
PGSC0003DMT400035624	Potato	cytosol	86.64	84.25
TraesCS2D01G593400.1	Wheat	cytosol	85.43	83.73
Solyc05g046340.1.1	Tomato	extracellular	85.43	83.73
TraesCS4B01G239500.1	Wheat	cytosol	83.81	83.47
TraesCS4D01G239500.1	Wheat	cytosol	84.62	83.27
TraesCSU01G037500.1	Wheat	cytosol	84.21	82.87
AT2G45790.1	Thale cress	cytosol	82.19	82.52
Bra004938.1-P	Field mustard	cytosol	82.19	82.52
CDX74766	Canola	cytosol	82.19	82.52
CDX83390	Canola	cytosol	82.19	82.52
CDY68272	Canola	cytosol	82.19	82.52
CDY18900	Canola	cytosol	82.19	82.52
Bra000403.1-P	Field mustard	cytosol	81.78	82.11
CDX95665	Canola	cytosol	81.78	82.11
TraesCS4A01G062700.1	Wheat	cytosol	82.59	81.93
GSMUA_Achr3P27260_001	Banana	cytosol	53.04	81.37
CDY27359	Canola	cytosol	80.97	81.3
CDY37065	Canola	cytosol	80.57	80.89
Bra039314.1-P	Field mustard	cytosol	80.16	80.16
CDX95664	Canola	cytosol	74.49	80.0
TraesCS7A01G089800.1	Wheat	cytosol	79.76	79.12
TraesCS4A01G389300.1	Wheat	cytosol	77.73	77.11
TraesCS7D01G085300.1	Wheat	cytosol	77.33	76.71
HORVU1Hr1G024000.1	Barley	cytosol	31.58	76.47
GSMUA_Achr9P23690_001	Banana	cytosol	49.39	75.31
Solyc08g076560.1.1	Tomato	cytosol	14.17	71.43
HORVU4Hr1G066430.10	Barley	cytosol, plasma membrane	74.49	70.77
HORVU5Hr1G098510.2	Barley	cytosol	37.65	67.88
OQU81094	Sorghum	cytosol	72.87	61.64
HORVU2Hr1G122950.1	Barley	cytosol	85.02	59.32
Solyc08g076550.1.1	Tomato	cytosol	31.17	32.35

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000	EntrezGene:732605
UniProt:A0A0R0FD94	ncoils:Coil	EMBL:DQ442994	EnsemblPlantsGene:GLYMA_18G229800	GO:GO:0003674	GO:GO:0003824
GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005975	GO:GO:0006013	GO:GO:0006139	GO:GO:0006464	GO:GO:0006487	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	GO:GO:0045047	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
EnsemblPlants:KRH00697	ProteinID:KRH00697	ProteinID:KRH00697.1	PFAM:PF03332	InterPro:PMM	PANTHER:PTHR10466
PANTHER:PTHR10466:SF0	MetaCyc:PWY-5659	MetaCyc:PWY-7456	MetaCyc:PWY-7586	MetaCyc:PWY-882	UniProt:Q1W376
SUPFAM:SSF56784	TIGRFAMs:TIGR01484	UniParc:UPI0000D4F74B	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:51867765..51872231

Molecular Weight (calculated)

28020.5 Da

IEP (calculated)

6.170

GRAVY (calculated)

-0.311

Length

247 amino acids

Sequence
(BLAST)

001: MAARRPGLIA LFDVDGTLTA PRKVVTPEML TFMQELRKVV TVGVVGGSDL IKISEQLGST VTNDYDYVFS ENGLVAHKEG KLIGTQSLKS FLGEEKLKEF
101: INFTLHYIAD LDIPIKRGTF IEFRSGMLNV SPIGRNCSQE ERDEFEKYDK VHNIRPKMVS VLREKFAHLN LTFSIGGQIS FDVFPQGWDK TYCLRYLDGF
201: NEIHFFGDKT YKGGNDHEIY ESERTVGHTV TSPDDTVKQC KSLFLEN

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.