Factsheet for TraesCS2B01G599300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G037500.1	Wheat	cytosol	98.8	98.01
TraesCS2D01G593400.1	Wheat	cytosol	98.8	97.62
TraesCS4B01G239500.1	Wheat	cytosol	95.18	95.56
EES11670	Sorghum	cytosol	89.16	89.16
Zm00001d001789_P001	Maize	cytosol	88.75	88.75
KRH00697	Soybean	cytosol	84.34	85.02
PGSC0003DMT400014862	Potato	cytosol	75.1	84.23
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	83.13	83.81
VIT_15s0046g03520.t01	Wine grape	cytosol	83.53	83.53
Solyc05g048760.2.1	Tomato	cytosol	82.73	81.75
PGSC0003DMT400055722	Potato	cytosol	82.33	81.35
GSMUA_Achr3P27270_001	Banana	cytosol	29.32	81.11
GSMUA_Achr9P23680_001	Banana	cytosol	29.32	81.11
Solyc08g008670.2.1	Tomato	cytosol, extracellular	81.93	80.95
CDY68272	Canola	cytosol	79.12	80.08
Bra000403.1-P	Field mustard	cytosol	78.71	79.67
CDX83390	Canola	cytosol	78.71	79.67
CDX95665	Canola	cytosol	78.31	79.27
AT2G45790.1	Thale cress	cytosol	78.31	79.27
Bra004938.1-P	Field mustard	cytosol	78.31	79.27
CDX74766	Canola	cytosol	78.31	79.27
CDY18900	Canola	cytosol	78.31	79.27
PGSC0003DMT400035624	Potato	cytosol	80.72	79.13
Solyc05g046340.1.1	Tomato	extracellular	79.52	78.57
CDX95664	Canola	cytosol	72.29	78.26
Bra039314.1-P	Field mustard	cytosol	77.51	78.14
CDY37065	Canola	cytosol	76.71	77.64
GSMUA_Achr3P27260_001	Banana	cytosol	50.2	77.64
CDY27359	Canola	cytosol	75.9	76.83
GSMUA_Achr9P23690_001	Banana	cytosol	46.59	71.6
HORVU2Hr1G122950.1	Barley	cytosol	98.39	69.21
Solyc08g076560.1.1	Tomato	cytosol	13.25	67.35
OQU81094	Sorghum	cytosol	75.9	64.73
Solyc08g076550.1.1	Tomato	cytosol	29.72	31.09

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF03332	InterPro:PMM
PANTHER:PTHR10466	PANTHER:PTHR10466:SF0	SUPFAM:SSF56784	TIGRFAMs:TIGR01484	EnsemblPlantsGene:TraesCS2B01G599300	EnsemblPlants:TraesCS2B01G599300.1
TIGR:cd02585	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:781830398..781832653

Molecular Weight (calculated)

28252.6 Da

IEP (calculated)

5.916

GRAVY (calculated)

-0.355

Length

249 amino acids

Sequence
(BLAST)

001: MAAARKNAGV LALFDVDGTL TAPRKEVTPE MLEFMKRLRE NVTVGVVGGS DLVKISEQLG KSVITDYDYV FSENGLVAHK DGKLIGTQSL KTYLGDDQLK
101: EFINFTLHYI ADLDIPIKRG TFIEFRSGMI NVSPIGRNCS QEERDDFEKY DKVHNVRPKM VSVLREKFAH LNLTFSIGGQ ISFDVFPQGW DKTYCLRYLE
201: EFKEIHFFGD KTYKGGNDHE IFESDRTVGH TVTSPNDTVQ QCKSIFLSE

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.