Factsheet for PGSC0003DMT400014862

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055722	Potato	cytosol	96.4	84.92
KRH00697	Soybean	cytosol	89.64	80.57
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	88.29	79.35
PGSC0003DMT400035624	Potato	cytosol	90.54	79.13
Solyc08g076560.1.1	Tomato	cytosol	17.12	77.55
VIT_15s0046g03520.t01	Wine grape	cytosol	86.49	77.11
EES11670	Sorghum	cytosol	84.23	75.1
TraesCS2B01G599300.1	Wheat	golgi	84.23	75.1
Zm00001d001789_P001	Maize	cytosol	83.78	74.7
TraesCS2D01G593400.1	Wheat	cytosol	84.68	74.6
GSMUA_Achr3P27260_001	Banana	cytosol	54.05	74.53
AT2G45790.1	Thale cress	cytosol	82.43	74.39
CDX95664	Canola	cytosol	77.03	74.35
CDY68272	Canola	cytosol	81.98	73.98
CDX83390	Canola	cytosol	81.98	73.98
TraesCS4A01G062700.1	Wheat	cytosol	82.88	73.9
TraesCS4B01G239500.1	Wheat	cytosol	82.43	73.79
TraesCSU01G037500.1	Wheat	cytosol	83.33	73.71
Bra000403.1-P	Field mustard	cytosol	81.53	73.58
Bra004938.1-P	Field mustard	cytosol	81.53	73.58
CDX74766	Canola	cytosol	81.53	73.58
CDX95665	Canola	cytosol	81.53	73.58
CDY18900	Canola	cytosol	81.53	73.58
TraesCS4D01G239500.1	Wheat	cytosol	82.88	73.31
GSMUA_Achr9P23680_001	Banana	cytosol	29.28	72.22
GSMUA_Achr3P27270_001	Banana	cytosol	29.28	72.22
CDY37065	Canola	cytosol	79.73	71.95
CDY27359	Canola	cytosol	78.83	71.14
TraesCS7A01G089800.1	Wheat	cytosol	79.28	70.68
HORVU1Hr1G024000.1	Barley	cytosol	32.43	70.59
TraesCS4A01G389300.1	Wheat	cytosol	78.83	70.28
Bra039314.1-P	Field mustard	cytosol	77.93	70.04
GSMUA_Achr9P23690_001	Banana	cytosol	50.45	69.14
TraesCS7D01G085300.1	Wheat	cytosol	77.48	69.08
HORVU4Hr1G066430.10	Barley	cytosol, plasma membrane	76.58	65.38
HORVU5Hr1G098510.2	Barley	cytosol	39.64	64.23
OQU81094	Sorghum	cytosol	72.97	55.48
HORVU2Hr1G122950.1	Barley	cytosol	83.78	52.54

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987
GO:GO:0016853	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M1A512
PFAM:PF03332	EnsemblPlantsGene:PGSC0003DMG400005806	PGSC:PGSC0003DMG400005806	EnsemblPlants:PGSC0003DMT400014862	InterPro:PMM	PANTHER:PTHR10466
PANTHER:PTHR10466:SF0	SUPFAM:SSF56784	TIGRFAMs:TIGR01484	UniParc:UPI00029565A1	:	:

Description

Phosphomannomutase [Source:PGSC_GENE;Acc:PGSC0003DMG400005806]

Coordinates

chr8:+:5489557..5492735

Molecular Weight (calculated)

25283.0 Da

IEP (calculated)

5.695

GRAVY (calculated)

-0.348

Length

222 amino acids

Sequence
(BLAST)

001: MAARKAGLIA LFDVDGTLTA PRKVVTIGVV GGSDLVKISE QLGNTVTNDY DYVFSENGLV AHKDGKLIGK QSLKSYLGDE KLKEFINFTL HYIADLDIPI
101: KRGTFIEFRS GMLNVSPIGR NCSQEERDEF EKYDKVQKIR ETMVSVLREK FSHFNLTFSI GGQISFDVFP QGWDKTYCLR YLEEFNEIQF FGDKTYKGGN
201: DHEIYESERI VGHTDPLKTS FF

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.