Factsheet for PGSC0003DMT400035624

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g046340.1.1	Tomato	extracellular	94.09	94.84
PGSC0003DMT400055722	Potato	cytosol	90.94	91.67
PGSC0003DMT400014862	Potato	cytosol	79.13	90.54
KRH00697	Soybean	cytosol	84.25	86.64
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	83.07	85.43
VIT_15s0046g03520.t01	Wine grape	cytosol	81.5	83.13
TraesCS2B01G599300.1	Wheat	golgi	79.13	80.72
EES11670	Sorghum	cytosol	78.74	80.32
GSMUA_Achr3P27270_001	Banana	cytosol	28.35	80.0
GSMUA_Achr9P23680_001	Banana	cytosol	28.35	80.0
Zm00001d001789_P001	Maize	cytosol	78.35	79.92
TraesCS4B01G239500.1	Wheat	cytosol	77.95	79.84
TraesCS2D01G593400.1	Wheat	cytosol	79.13	79.76
TraesCS4A01G062700.1	Wheat	cytosol	77.95	79.52
TraesCSU01G037500.1	Wheat	cytosol	78.35	79.28
TraesCS4D01G239500.1	Wheat	cytosol	78.35	79.28
AT2G45790.1	Thale cress	cytosol	76.77	79.27
CDY68272	Canola	cytosol	75.59	78.05
CDY18900	Canola	cytosol	75.59	78.05
CDX83390	Canola	cytosol	75.59	78.05
CDX74766	Canola	cytosol	75.59	78.05
Bra004938.1-P	Field mustard	cytosol	75.59	78.05
Bra000403.1-P	Field mustard	cytosol	75.2	77.64
CDX95665	Canola	cytosol	75.2	77.64
GSMUA_Achr3P27260_001	Banana	cytosol	49.21	77.64
CDY37065	Canola	cytosol	74.41	76.83
CDY27359	Canola	cytosol	74.02	76.42
CDX95664	Canola	cytosol	68.5	75.65
TraesCS7A01G089800.1	Wheat	cytosol	74.02	75.5
Bra039314.1-P	Field mustard	cytosol	73.23	75.3
TraesCS4A01G389300.1	Wheat	cytosol	72.83	74.3
TraesCS7D01G085300.1	Wheat	cytosol	72.05	73.49
GSMUA_Achr9P23690_001	Banana	cytosol	45.67	71.6
HORVU1Hr1G024000.1	Barley	cytosol	27.17	67.65
HORVU4Hr1G066430.10	Barley	cytosol, plasma membrane	68.9	67.31
HORVU5Hr1G098510.2	Barley	cytosol	33.86	62.77
OQU81094	Sorghum	cytosol	67.32	58.56
HORVU2Hr1G122950.1	Barley	cytosol	79.13	56.78

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	EntrezGene:102595382	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000
GO:GO:0003674	GO:GO:0003824	GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298
GO:GO:0009987	GO:GO:0016853	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
UniProt:M1B2K5	PFAM:PF03332	EnsemblPlantsGene:PGSC0003DMG400013702	PGSC:PGSC0003DMG400013702	EnsemblPlants:PGSC0003DMT400035624	InterPro:PMM
PANTHER:PTHR10466	PANTHER:PTHR10466:SF0	SUPFAM:SSF56784	TIGRFAMs:TIGR01484	UniParc:UPI0002957B5C	RefSeq:XP_015170424.1

Description

Phosphomannomutase [Source:PGSC_GENE;Acc:PGSC0003DMG400013702]

Coordinates

chr5:+:43039786..43044138

Molecular Weight (calculated)

28742.5 Da

IEP (calculated)

6.668

GRAVY (calculated)

-0.326

Length

254 amino acids

Sequence
(BLAST)

001: MRARKDGLIA LFDVDGTLTA PRKECTPEIL KFMQELRKVV TIGVVGGSDL VKISEQLGNS VMNDYDYVFS ENGLVAHKDG KLIGKQSLKS FLGDEKLKEF
101: INFTLRYIAD LDIPIKRGTF IEFRSGMLNV SPIGGNCSQE EREEFVKYDK VQKIRETMIS VLRGKFAHLN LTFSIGGQIS FDVFPQGWDK TYCLRYLEEF
201: NEIHFFGDKT YKGGNDHEIY ESKRTVGHTV TSPEDTVKQC SVLFLSKDNG NGCC

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.