Factsheet for VIT_15s0046g03520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00697	Soybean	cytosol	89.16	89.88
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	87.95	88.66
PGSC0003DMT400014862	Potato	cytosol	77.11	86.49
Solyc08g008670.2.1	Tomato	cytosol, extracellular	85.94	84.92
Solyc05g048760.2.1	Tomato	cytosol	85.94	84.92
PGSC0003DMT400055722	Potato	cytosol	85.54	84.52
Zm00001d001789_P001	Maize	cytosol	83.94	83.94
EES11670	Sorghum	cytosol	83.94	83.94
TraesCS2B01G599300.1	Wheat	golgi	83.53	83.53
TraesCS4B01G239500.1	Wheat	cytosol	83.13	83.47
TraesCS4D01G239500.1	Wheat	cytosol	83.94	83.27
TraesCS2D01G593400.1	Wheat	cytosol	83.94	82.94
GSMUA_Achr3P27270_001	Banana	cytosol	29.72	82.22
Solyc05g046340.1.1	Tomato	extracellular	83.13	82.14
TraesCSU01G037500.1	Wheat	cytosol	82.73	82.07
TraesCS4A01G062700.1	Wheat	cytosol	81.93	81.93
PGSC0003DMT400035624	Potato	cytosol	83.13	81.5
CDY68272	Canola	cytosol	80.32	81.3
CDX83390	Canola	cytosol	80.32	81.3
GSMUA_Achr9P23680_001	Banana	cytosol	29.32	81.11
CDX95665	Canola	cytosol	79.92	80.89
Bra000403.1-P	Field mustard	cytosol	79.92	80.89
GSMUA_Achr3P27260_001	Banana	cytosol	52.21	80.75
Bra004938.1-P	Field mustard	cytosol	79.52	80.49
CDY18900	Canola	cytosol	79.52	80.49
AT2G45790.1	Thale cress	cytosol	79.52	80.49
CDX74766	Canola	cytosol	79.52	80.49
CDY37065	Canola	cytosol	78.71	79.67
CDX95664	Canola	cytosol	73.49	79.57
CDY27359	Canola	cytosol	78.31	79.27
Bra039314.1-P	Field mustard	cytosol	77.51	78.14
TraesCS7A01G089800.1	Wheat	cytosol	77.91	77.91
TraesCS7D01G085300.1	Wheat	cytosol	77.11	77.11
TraesCS4A01G389300.1	Wheat	cytosol	76.71	76.71
GSMUA_Achr9P23690_001	Banana	cytosol	49.8	76.54
HORVU1Hr1G024000.1	Barley	cytosol	30.52	74.51
HORVU4Hr1G066430.10	Barley	cytosol, plasma membrane	73.9	70.77
Solyc08g076560.1.1	Tomato	cytosol	13.25	67.35
HORVU5Hr1G098510.2	Barley	cytosol	36.55	66.42
OQU81094	Sorghum	cytosol	71.49	60.96
HORVU2Hr1G122950.1	Barley	cytosol	82.73	58.19
Solyc08g076550.1.1	Tomato	cytosol	28.92	30.25

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	EntrezGene:100260186	wikigene:100260186	Gene3D:3.30.1240.20
Gene3D:3.40.50.1000	EMBL:AM466668	ProteinID:CAN81334	ProteinID:CAN81334.1	ProteinID:CBI40303	ProteinID:CBI40303.3
UniProt:D7UC38	EMBL:FN596755	GO:GO:0003674	GO:GO:0003824	GO:GO:0004615	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0006013
GO:GO:0006139	GO:GO:0006464	GO:GO:0006487	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009298	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:0045047
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	EntrezGene:LOC100260186	wikigene:LOC100260186
PFAM:PF03332	InterPro:PMM	PANTHER:PTHR10466	PANTHER:PTHR10466:SF0	SUPFAM:SSF56784	TIGR:TC51885
TIGRFAMs:TIGR01484	UniParc:UPI00015CA5E5	ArrayExpress:VIT_15s0046g03520	EnsemblPlantsGene:VIT_15s0046g03520	EnsemblPlants:VIT_15s0046g03520.t01	RefSeq:XP_002267677
RefSeq:XP_002267677.1	RefSeq:XP_019080941.1	:	:	:	:

Description

Phosphomannomutase [Source:UniProtKB/TrEMBL;Acc:D7UC38]

Coordinates

chr15:-:20074367..20079287

Molecular Weight (calculated)

28115.6 Da

IEP (calculated)

5.640

GRAVY (calculated)

-0.247

Length

249 amino acids

Sequence
(BLAST)

001: MAARKAGLIA LFDVDGTLTA PRKVATPQML EFMRKLRKVI TVGVVGGSDL VKISEQLGSS VIDDYDYVFS ENGLVAHKDG KLIGTQSLKT FLGEEKLKEI
101: INFTLHYIAD LDIPIKRGTF IEFRSGMLNV SPIGRNCSQE ERDEFEKYDK IHNIRPKMVS VLREKFAHLN LTFSIGGQIS FDVFPQGWDK TYCLRYLDDF
201: PEIHFFGDKT YEAGNDHEIY ESERTVGHTV TSPDDTVEQC TALFLAKSS

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.