Factsheet for Solyc08g008670.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g048760.2.1	Tomato	cytosol	98.81	98.81
Solyc05g046340.1.1	Tomato	extracellular	89.29	89.29
KRH00697	Soybean	cytosol	87.3	89.07
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	86.11	87.85
VIT_15s0046g03520.t01	Wine grape	cytosol	84.92	85.94
GSMUA_Achr9P23680_001	Banana	cytosol	29.76	83.33
Zm00001d001789_P001	Maize	cytosol	81.75	82.73
EES11670	Sorghum	cytosol	81.75	82.73
GSMUA_Achr3P27270_001	Banana	cytosol	29.37	82.22
GSMUA_Achr3P27260_001	Banana	cytosol	52.38	81.99
TraesCS2B01G599300.1	Wheat	golgi	80.95	81.93
TraesCS2D01G593400.1	Wheat	cytosol	81.35	81.35
TraesCS4B01G239500.1	Wheat	cytosol	79.76	81.05
AT2G45790.1	Thale cress	cytosol	78.57	80.49
CDY18900	Canola	cytosol	78.57	80.49
CDX74766	Canola	cytosol	78.57	80.49
Bra004938.1-P	Field mustard	cytosol	78.57	80.49
TraesCS4D01G239500.1	Wheat	cytosol	80.16	80.48
TraesCSU01G037500.1	Wheat	cytosol	80.16	80.48
TraesCS4A01G062700.1	Wheat	cytosol	79.37	80.32
CDY68272	Canola	cytosol	78.17	80.08
CDX83390	Canola	cytosol	78.17	80.08
Bra000403.1-P	Field mustard	cytosol	77.78	79.67
CDX95665	Canola	cytosol	77.78	79.67
CDX95664	Canola	cytosol	71.83	78.7
CDY37065	Canola	cytosol	76.19	78.05
CDY27359	Canola	cytosol	75.79	77.64
Solyc08g076560.1.1	Tomato	cytosol	15.08	77.55
TraesCS7A01G089800.1	Wheat	cytosol	75.79	76.71
Bra039314.1-P	Field mustard	cytosol	75.0	76.52
GSMUA_Achr9P23690_001	Banana	cytosol	48.81	75.93
TraesCS4A01G389300.1	Wheat	cytosol	74.6	75.5
TraesCS7D01G085300.1	Wheat	cytosol	74.6	75.5
HORVU1Hr1G024000.1	Barley	cytosol	28.57	70.59
HORVU4Hr1G066430.10	Barley	cytosol, plasma membrane	72.22	70.0
HORVU5Hr1G098510.2	Barley	cytosol	35.32	64.96
OQU81094	Sorghum	cytosol	69.05	59.59
HORVU2Hr1G122950.1	Barley	cytosol	80.56	57.34
Solyc08g076550.1.1	Tomato	cytosol	32.94	34.87

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0006013	GO:GO:0006139	GO:GO:0006464	GO:GO:0006487
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	GO:GO:0045047	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	UniProt:K4CJ01	PFAM:PF03332	InterPro:PMM	PANTHER:PTHR10466	PANTHER:PTHR10466:SF0
SUPFAM:SSF56784	EnsemblPlantsGene:Solyc08g008670.2	EnsemblPlants:Solyc08g008670.2.1	TIGRFAMs:TIGR01484	UniParc:UPI000276AE8F	:

Description

Phosphomannomutase [Source:UniProtKB/TrEMBL;Acc:K4CJ01]

Coordinates

chr8:-:3034300..3038225

Molecular Weight (calculated)

28529.9 Da

IEP (calculated)

6.174

GRAVY (calculated)

-0.419

Length

252 amino acids

Sequence
(BLAST)

001: MAARKAGLIA LFDVDGTLTA PRKESTPQML KFMQELRKVV TVGVVGGSDL VKISEQLGNT VTNDYDYVFS ENGLVAHKDG KLIGKQSLKS HLGDEKLKEF
101: INFTLHYIAD LDIPIKRGTF IEFRSGMLNV SPIGRNCSQE ERDEFEKYDK AQKIRETMVS VLREKFAHFN LTFSIGGQIS FDVFPQGWDK TYCLRYLEEF
201: NEIHFFGDKT YKGGNDHEIY ESERTVGHTV TSPEETLKQC SVLFLGKDNG SS

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.