Factsheet for Solyc05g046340.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035624	Potato	cytosol	94.84	94.09
Solyc05g048760.2.1	Tomato	cytosol	89.29	89.29
Solyc08g008670.2.1	Tomato	cytosol, extracellular	89.29	89.29
KRH00697	Soybean	cytosol	83.73	85.43
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	82.54	84.21
VIT_15s0046g03520.t01	Wine grape	cytosol	82.14	83.13
TraesCS2B01G599300.1	Wheat	golgi	78.57	79.52
EES11670	Sorghum	cytosol	78.57	79.52
Zm00001d001789_P001	Maize	cytosol	78.57	79.52
TraesCS4A01G062700.1	Wheat	cytosol	78.17	79.12
TraesCS2D01G593400.1	Wheat	cytosol	78.57	78.57
GSMUA_Achr3P27260_001	Banana	cytosol	50.0	78.26
TraesCS4B01G239500.1	Wheat	cytosol	76.98	78.23
TraesCS4D01G239500.1	Wheat	cytosol	77.78	78.09
TraesCSU01G037500.1	Wheat	cytosol	77.78	78.09
AT2G45790.1	Thale cress	cytosol	76.19	78.05
GSMUA_Achr3P27270_001	Banana	cytosol	27.78	77.78
GSMUA_Achr9P23680_001	Banana	cytosol	27.78	77.78
CDY68272	Canola	cytosol	75.79	77.64
CDX83390	Canola	cytosol	75.79	77.64
Bra000403.1-P	Field mustard	cytosol	75.4	77.24
Bra004938.1-P	Field mustard	cytosol	75.4	77.24
CDX74766	Canola	cytosol	75.4	77.24
CDX95665	Canola	cytosol	75.4	77.24
CDY18900	Canola	cytosol	75.4	77.24
CDY37065	Canola	cytosol	75.4	77.24
CDY27359	Canola	cytosol	74.6	76.42
CDX95664	Canola	cytosol	69.44	76.09
Bra039314.1-P	Field mustard	cytosol	73.41	74.9
TraesCS7A01G089800.1	Wheat	cytosol	73.81	74.7
TraesCS4A01G389300.1	Wheat	cytosol	73.02	73.9
TraesCS7D01G085300.1	Wheat	cytosol	72.22	73.09
GSMUA_Achr9P23690_001	Banana	cytosol	46.43	72.22
Solyc08g076560.1.1	Tomato	cytosol	13.89	71.43
HORVU4Hr1G066430.10	Barley	cytosol, plasma membrane	69.84	67.69
HORVU1Hr1G024000.1	Barley	cytosol	27.38	67.65
HORVU5Hr1G098510.2	Barley	cytosol	34.13	62.77
OQU81094	Sorghum	cytosol	67.86	58.56
HORVU2Hr1G122950.1	Barley	cytosol	78.17	55.65
Solyc08g076550.1.1	Tomato	cytosol	30.16	31.93

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0006013	GO:GO:0006139	GO:GO:0006464	GO:GO:0006487
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	GO:GO:0045047	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	UniProt:K4C0W7	PFAM:PF03332	InterPro:PMM	PANTHER:PTHR10466	PANTHER:PTHR10466:SF0
SUPFAM:SSF56784	EnsemblPlantsGene:Solyc05g046340.1	EnsemblPlants:Solyc05g046340.1.1	TIGRFAMs:TIGR01484	UniParc:UPI0002766ACB	:

Description

Phosphomannomutase [Source:UniProtKB/TrEMBL;Acc:K4C0W7]

Coordinates

chr5:+:58626691..58628680

Molecular Weight (calculated)

28687.6 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.291

Length

252 amino acids

Sequence
(BLAST)

001: MRARKAGLIA LFDVDGTLTA PRKECTPEML KFMRELRKVV TIGVVGGSDL VKISEQLGSS VMNDYDYVFS ENGLVAHKDG KLIGKQSMKS FLGDEKLKEF
101: INFTLCYIAD LDIPIKRGTF IEFRSGMLNV SPIGGNCSQE EREEFVKYDK VQKIRETMIS VLRGKFAHLN LTFSIGGQIS FDVFPQGWDK TYCLRYLEEF
201: NEIHFFGDKT YKGGNDHEIY ESKRTVGHTI TSPEDTMKQC FVLFFDKDNG TL

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.