Factsheet for TraesCS2D01G593400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G599300.1	Wheat	golgi	97.62	98.8
TraesCSU01G037500.1	Wheat	cytosol	97.62	98.01
TraesCS4D01G239500.1	Wheat	cytosol	95.24	95.62
EES11670	Sorghum	cytosol	87.7	88.75
Zm00001d001789_P001	Maize	cytosol	87.3	88.35
TraesCS7D01G085300.1	Wheat	cytosol	86.11	87.15
KRH00697	Soybean	cytosol	83.73	85.43
PGSC0003DMT400014862	Potato	cytosol	74.6	84.68
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	82.54	84.21
VIT_15s0046g03520.t01	Wine grape	cytosol	82.94	83.94
GSMUA_Achr3P27270_001	Banana	cytosol	29.37	82.22
GSMUA_Achr9P23680_001	Banana	cytosol	29.37	82.22
Solyc05g048760.2.1	Tomato	cytosol	82.14	82.14
PGSC0003DMT400055722	Potato	cytosol	81.75	81.75
Solyc08g008670.2.1	Tomato	cytosol, extracellular	81.35	81.35
CDY68272	Canola	cytosol	78.17	80.08
Bra000403.1-P	Field mustard	cytosol	77.78	79.67
CDX83390	Canola	cytosol	77.78	79.67
CDX95665	Canola	cytosol	77.38	79.27
AT2G45790.1	Thale cress	cytosol	77.38	79.27
Bra004938.1-P	Field mustard	cytosol	77.38	79.27
CDX74766	Canola	cytosol	77.38	79.27
CDY18900	Canola	cytosol	77.38	79.27
PGSC0003DMT400035624	Potato	cytosol	79.76	79.13
Solyc05g046340.1.1	Tomato	extracellular	78.57	78.57
CDX95664	Canola	cytosol	71.43	78.26
Bra039314.1-P	Field mustard	cytosol	76.59	78.14
CDY37065	Canola	cytosol	75.79	77.64
GSMUA_Achr3P27260_001	Banana	cytosol	49.6	77.64
CDY27359	Canola	cytosol	75.0	76.83
GSMUA_Achr9P23690_001	Banana	cytosol	46.03	71.6
HORVU2Hr1G122950.1	Barley	cytosol	96.43	68.64
Solyc08g076560.1.1	Tomato	cytosol	13.1	67.35
OQU81094	Sorghum	cytosol	75.4	65.07
Solyc08g076550.1.1	Tomato	cytosol	29.37	31.09

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF03332	InterPro:PMM
PANTHER:PTHR10466	PANTHER:PTHR10466:SF0	SUPFAM:SSF56784	TIGRFAMs:TIGR01484	EnsemblPlantsGene:TraesCS2D01G593400	EnsemblPlants:TraesCS2D01G593400.1
TIGR:cd02585	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:647968038..647970446

Molecular Weight (calculated)

28466.9 Da

IEP (calculated)

5.917

GRAVY (calculated)

-0.318

Length

252 amino acids

Sequence
(BLAST)

001: MAAAAAARKT AGVLALFDVD GTLTAPRKEV TPEMLEFMKR LRENVTVGVV GGSDLVKISE QLGKSVITDY DYVFSENGLV AHKDGKLIGT QSLKTYLGDD
101: QLKEFINFTL HYIADLDIPI KRGTFIEFRS GMINVSPIGR NCSQEERDDF EKYDKVHNVR PKMVSVLREK FAHLNLTFSI GGQISFDVFP QGWDKTYCLR
201: YLEEFKEIHF FGDKTYKGGN DHEIFESERT VGHTVTSPND TVQQCKSIFL SE

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.