Factsheet for TraesCS4D01G239500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G239500.1	Wheat	cytosol	96.02	97.18
TraesCS2D01G593400.1	Wheat	cytosol	95.62	95.24
TraesCS4A01G062700.1	Wheat	cytosol	94.02	94.78
Zm00001d001789_P001	Maize	cytosol	86.85	87.55
TraesCS7D01G085300.1	Wheat	cytosol	86.85	87.55
EES11670	Sorghum	cytosol	86.85	87.55
KRH00697	Soybean	cytosol	83.27	84.62
VIT_15s0046g03520.t01	Wine grape	cytosol	83.27	83.94
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	82.07	83.4
PGSC0003DMT400014862	Potato	cytosol	73.31	82.88
GSMUA_Achr9P23680_001	Banana	cytosol	29.48	82.22
GSMUA_Achr3P27270_001	Banana	cytosol	29.48	82.22
HORVU4Hr1G066430.10	Barley	cytosol, plasma membrane	84.06	81.15
Solyc05g048760.2.1	Tomato	cytosol	81.27	80.95
PGSC0003DMT400055722	Potato	cytosol	80.88	80.56
Solyc08g008670.2.1	Tomato	cytosol, extracellular	80.48	80.16
CDY68272	Canola	cytosol	78.09	79.67
Bra000403.1-P	Field mustard	cytosol	77.69	79.27
CDX83390	Canola	cytosol	77.69	79.27
CDY18900	Canola	cytosol	77.29	78.86
CDX95665	Canola	cytosol	77.29	78.86
AT2G45790.1	Thale cress	cytosol	77.29	78.86
CDX74766	Canola	cytosol	77.29	78.86
Bra004938.1-P	Field mustard	cytosol	77.29	78.86
PGSC0003DMT400035624	Potato	cytosol	79.28	78.35
CDX95664	Canola	cytosol	71.31	77.83
Solyc05g046340.1.1	Tomato	extracellular	78.09	77.78
Bra039314.1-P	Field mustard	cytosol	76.49	77.73
GSMUA_Achr3P27260_001	Banana	cytosol	49.8	77.64
CDY37065	Canola	cytosol	75.7	77.24
CDY27359	Canola	cytosol	74.9	76.42
GSMUA_Achr9P23690_001	Banana	cytosol	45.82	70.99
Solyc08g076560.1.1	Tomato	cytosol	13.15	67.35
OQU81094	Sorghum	cytosol	74.1	63.7
Solyc08g076550.1.1	Tomato	cytosol	28.69	30.25

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF03332	InterPro:PMM
PANTHER:PTHR10466	PANTHER:PTHR10466:SF0	SUPFAM:SSF56784	TIGRFAMs:TIGR01484	EnsemblPlantsGene:TraesCS4D01G239500	EnsemblPlants:TraesCS4D01G239500.1
TIGR:cd02585	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:401531461..401533806

Molecular Weight (calculated)

28494.0 Da

IEP (calculated)

6.313

GRAVY (calculated)

-0.351

Length

251 amino acids

Sequence
(BLAST)

001: MVASAARKNA GVLALFDVDG TLTAPRKEVT PEMLEFMKRL RENVTVGVVG GSDLVKISEQ LGKSVITDYD YVFSENGLVA HKDGKLIGTQ SLKTYLGDDQ
101: LKEFINFTLH YIADLDIPIK RGTFIEFRSG MINVSPIGRN CSQEERDDFE KYDKVHNVRP KMVSMLREKF AHLNLTFSIG GQISFDVFPH GWDKTYCLRY
201: LDEFKEIHFF GDKTYKGGND HEIFESDRTV GHTVTSPDDT VQQCRSIFLS K

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.