Factsheet for TraesCS4A01G062700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G239500.1	Wheat	cytosol	94.78	94.02
TraesCS4B01G239500.1	Wheat	cytosol	93.57	93.95
TraesCS4A01G389300.1	Wheat	cytosol	88.35	88.35
TraesCS7A01G089800.1	Wheat	cytosol	87.95	87.95
Zm00001d001789_P001	Maize	cytosol	86.35	86.35
EES11670	Sorghum	cytosol	86.35	86.35
PGSC0003DMT400014862	Potato	cytosol	73.9	82.88
KRH00697	Soybean	cytosol	81.93	82.59
GSMUA_Achr3P27270_001	Banana	cytosol	29.72	82.22
GSMUA_Achr9P23680_001	Banana	cytosol	29.72	82.22
VIT_15s0046g03520.t01	Wine grape	cytosol	81.93	81.93
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	80.72	81.38
Solyc05g048760.2.1	Tomato	cytosol	81.12	80.16
PGSC0003DMT400055722	Potato	cytosol	80.72	79.76
Solyc08g008670.2.1	Tomato	cytosol, extracellular	80.32	79.37
HORVU4Hr1G066430.10	Barley	cytosol, plasma membrane	82.33	78.85
Solyc05g046340.1.1	Tomato	extracellular	79.12	78.17
PGSC0003DMT400035624	Potato	cytosol	79.52	77.95
CDY68272	Canola	cytosol	76.31	77.24
GSMUA_Achr3P27260_001	Banana	cytosol	49.8	77.02
Bra000403.1-P	Field mustard	cytosol	75.9	76.83
CDX83390	Canola	cytosol	75.5	76.42
CDX95664	Canola	cytosol	70.28	76.09
CDY18900	Canola	cytosol	75.1	76.02
Bra004938.1-P	Field mustard	cytosol	75.1	76.02
CDX74766	Canola	cytosol	75.1	76.02
CDX95665	Canola	cytosol	75.1	76.02
AT2G45790.1	Thale cress	cytosol	75.1	76.02
Bra039314.1-P	Field mustard	cytosol	74.7	75.3
CDY37065	Canola	cytosol	73.9	74.8
CDY27359	Canola	cytosol	73.09	73.98
GSMUA_Achr9P23690_001	Banana	cytosol	44.98	69.14
Solyc08g076560.1.1	Tomato	cytosol	13.25	67.35
OQU81094	Sorghum	cytosol	72.69	61.99
Solyc08g076550.1.1	Tomato	cytosol	29.72	31.09

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF03332	InterPro:PMM
PANTHER:PTHR10466	PANTHER:PTHR10466:SF0	SUPFAM:SSF56784	TIGRFAMs:TIGR01484	EnsemblPlantsGene:TraesCS4A01G062700	EnsemblPlants:TraesCS4A01G062700.1
TIGR:cd02585	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:59282608..59285384

Molecular Weight (calculated)

28186.5 Da

IEP (calculated)

5.370

GRAVY (calculated)

-0.279

Length

249 amino acids

Sequence
(BLAST)

001: MVASVANAGV LALFDVDGTL TAPRKEVTLE MLEFMKRLRE NVTVGVVGGS DLVKISEQLG KSVITDYDYV FSENGLVAHK DGKLIGTQSL KTYLGDDQLK
101: EFINYTLHYI ADLDIPIKRG TFIEFRSGMI NVSPIGRNCS QEERDDFEKY DKVHNVQPTM VSVLREKFAH LNLTFSIGGQ ISFDVFPQGW DKTYCLRYLN
201: EFKEIHFFGD KTYKGGNDHE IFESDRTVGH TITSPDDTVQ QCRSIFLSK

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.