Factsheet for TraesCS4A01G389300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G089800.1	Wheat	cytosol	94.78	94.78
TraesCS7D01G085300.1	Wheat	cytosol	93.17	93.17
TraesCS4A01G062700.1	Wheat	cytosol	88.35	88.35
Zm00001d001789_P001	Maize	cytosol	83.53	83.53
EES11670	Sorghum	cytosol	83.53	83.53
GSMUA_Achr9P23680_001	Banana	cytosol	28.92	80.0
GSMUA_Achr3P27270_001	Banana	cytosol	28.51	78.89
PGSC0003DMT400014862	Potato	cytosol	70.28	78.83
KRH00697	Soybean	cytosol	77.11	77.73
VIT_15s0046g03520.t01	Wine grape	cytosol	76.71	76.71
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	75.9	76.52
Solyc05g048760.2.1	Tomato	cytosol	76.31	75.4
PGSC0003DMT400055722	Potato	cytosol	75.9	75.0
CDX95665	Canola	cytosol	73.9	74.8
Solyc08g008670.2.1	Tomato	cytosol, extracellular	75.5	74.6
HORVU1Hr1G024000.1	Barley	cytosol	30.52	74.51
Bra039314.1-P	Field mustard	cytosol	73.9	74.49
CDY68272	Canola	cytosol	73.49	74.39
CDY37065	Canola	cytosol	73.49	74.39
CDX83390	Canola	cytosol	73.49	74.39
Bra000403.1-P	Field mustard	cytosol	73.09	73.98
Bra004938.1-P	Field mustard	cytosol	73.09	73.98
CDX74766	Canola	cytosol	73.09	73.98
CDY18900	Canola	cytosol	73.09	73.98
CDY27359	Canola	cytosol	72.69	73.58
AT2G45790.1	Thale cress	cytosol	72.29	73.17
Solyc05g046340.1.1	Tomato	extracellular	73.9	73.02
PGSC0003DMT400035624	Potato	cytosol	74.3	72.83
CDX95664	Canola	cytosol	66.67	72.17
GSMUA_Achr3P27260_001	Banana	cytosol	46.18	71.43
HORVU5Hr1G098510.2	Barley	cytosol	37.75	68.61
GSMUA_Achr9P23690_001	Banana	cytosol	43.37	66.67
OQU81094	Sorghum	cytosol	73.49	62.67
Solyc08g076560.1.1	Tomato	cytosol	11.24	57.14
Solyc08g076550.1.1	Tomato	cytosol	28.92	30.25

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987
InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF03332	InterPro:PMM
PANTHER:PTHR10466	PANTHER:PTHR10466:SF0	SUPFAM:SSF56784	TIGRFAMs:TIGR01484	EnsemblPlantsGene:TraesCS4A01G389300	EnsemblPlants:TraesCS4A01G389300.1
TIGR:cd02585	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:666938286..666940608

Molecular Weight (calculated)

28580.9 Da

IEP (calculated)

5.417

GRAVY (calculated)

-0.416

Length

249 amino acids

Sequence
(BLAST)

001: MAAARKNAEV LALFDVDDTI TAPRKEVSPE MREFMKRLRE IVSVGLVGGS DLVKISEQLG KSVITDYDYV FSENGLVAYR NGELIGTQSL KTYLGDDQIK
101: EFINFTLHYI ADLDIPIKRG TFIEFRNGMI NVSPIGRNCS QEERDDFEKY DKVHNVRPQM VSVLRDKFSH LNLTFSIGGQ ISFDVFPKGW DKTYCLRYLE
201: EFKEIHFFGD KTYKGGNDHE IFESDRTVGH TVTNPDDTMQ QCRSIFLSK

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.