CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001789_P001	Maize	cytosol	97.59	97.59
TraesCS2B01G599300.1	Wheat	golgi	89.16	89.16
TraesCS2D01G593400.1	Wheat	cytosol	88.75	87.7
TraesCSU01G037500.1	Wheat	cytosol	87.95	87.25
TraesCS4B01G239500.1	Wheat	cytosol	86.75	87.1
TraesCS4D01G239500.1	Wheat	cytosol	87.55	86.85
TraesCS4A01G062700.1	Wheat	cytosol	86.35	86.35
KRH00697	Soybean	cytosol	85.54	86.23
GSMUA_Achr9P23680_001	Banana	cytosol	30.92	85.56
GSMUA_Achr3P27270_001	Banana	cytosol	30.92	85.56
TraesCS7A01G089800.1	Wheat	cytosol	85.14	85.14
KRH40498	Soybean	cytosol, endoplasmic reticulum, nucleus	84.34	85.02
PGSC0003DMT400014862	Potato	cytosol	75.1	84.23
VIT_15s0046g03520.t01	Wine grape	cytosol	83.94	83.94
TraesCS4A01G389300.1	Wheat	cytosol	83.53	83.53
TraesCS7D01G085300.1	Wheat	cytosol	82.33	82.33
Solyc05g048760.2.1	Tomato	cytosol	83.13	82.14
Solyc08g008670.2.1	Tomato	cytosol, extracellular	82.73	81.75
PGSC0003DMT400055722	Potato	cytosol	82.73	81.75
GSMUA_Achr3P27260_001	Banana	cytosol	51.81	80.12
CDY68272	Canola	cytosol	78.71	79.67
CDY18900	Canola	cytosol	78.31	79.27
Bra000403.1-P	Field mustard	cytosol	78.31	79.27
Bra004938.1-P	Field mustard	cytosol	78.31	79.27
CDX74766	Canola	cytosol	78.31	79.27
CDX83390	Canola	cytosol	78.31	79.27
CDX95665	Canola	cytosol	78.31	79.27
PGSC0003DMT400035624	Potato	cytosol	80.32	78.74
Solyc05g046340.1.1	Tomato	extracellular	79.52	78.57
AT2G45790.1	Thale cress	cytosol	77.11	78.05
CDY37065	Canola	cytosol	76.71	77.64
CDX95664	Canola	cytosol	71.08	76.96
Bra039314.1-P	Field mustard	cytosol	76.31	76.92
HORVU1Hr1G024000.1	Barley	cytosol	31.33	76.47
CDY27359	Canola	cytosol	75.5	76.42
GSMUA_Achr9P23690_001	Banana	cytosol	49.4	75.93
HORVU4Hr1G066430.10	Barley	cytosol, plasma membrane	77.51	74.23
HORVU5Hr1G098510.2	Barley	cytosol	38.15	69.34
OQU81094	Sorghum	cytosol	77.91	66.44
HORVU2Hr1G122950.1	Barley	cytosol	88.35	62.15
Solyc08g076560.1.1	Tomato	cytosol	11.65	59.18
Solyc08g076550.1.1	Tomato	cytosol	30.52	31.93

Protein Annotations

KEGG:00051+5.4.2.8	KEGG:00520+5.4.2.8	MapMan:10.3.1.2	Gene3D:3.30.1240.20	Gene3D:3.40.50.1000	EntrezGene:8085888
UniProt:C5YAM6	EnsemblPlants:EES11670	ProteinID:EES11670	ProteinID:EES11670.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004615	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005975	GO:GO:0006013	GO:GO:0006139	GO:GO:0006464	GO:GO:0006487	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	GO:GO:0045047	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
PFAM:PF03332	InterPro:PMM	PANTHER:PTHR10466	PANTHER:PTHR10466:SF0	MetaCyc:PWY-5659	MetaCyc:PWY-7456
MetaCyc:PWY-7586	MetaCyc:PWY-882	EnsemblPlantsGene:SORBI_3006G271500	SUPFAM:SSF56784	unigene:Sbi.4850	TIGRFAMs:TIGR01484
UniParc:UPI0001A87042	RefSeq:XP_002447342.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:60333934..60336887

Molecular Weight (calculated)

28213.6 Da

IEP (calculated)

6.166

GRAVY (calculated)

-0.298

Length

249 amino acids

Sequence
(BLAST)

001: MAAAGRNAGV LALFDVDGTL TAPRKVVTPE MLEFMKQLRQ HVTVGVVGGS DLVKITEQLG NTVITDYDYV FSENGLVAHK NGQLIGTQSL KSFVGEDKLK
101: EFINFTLHYI ADLDIPIKRG TFIEFRSGMI NVSPIGRNCS QEERDEFEKY DKVHNIRPKM VSVLREKFAH LNLTFSIGGQ ISFDVFPQGW DKTYCLRYLE
201: EFQEIHFFGD KTYKGGNDYE IFESERTVGH TVTSPNDTAQ QCRSLFMSK

Best Arabidopsis Sequence Match ( AT2G45790.1 )
(BLAST)

001: MAAKIPGVIA LFDVDGTLTA PRKEATPELL DFIRELRKVV TIGVVGGSDL SKISEQLGKT VTNDYDYCFS ENGLVAHKDG KSIGIQSLKL HLGDDKLKEL
101: INFTLHYIAD LDIPIKRGTF IEFRNGMLNV SPIGRNCSQE ERDEFERYDK VQNIRPKMVA ELRERFAHLN LTFSIGGQIS FDVFPKGWDK TYCLQYLEDF
201: SEIHFFGDKT YEGGNDYEIY ESPKTIGHSV TSPDDTVAKC KALFMS

Arabidopsis Description

PMMPhosphomannomutase [Source:UniProtKB/Swiss-Prot;Acc:O80840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.