CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72805	Soybean	cytosol, mitochondrion, nucleus	93.57	92.09
KRH64170	Soybean	nucleus	61.45	68.92
KRH53776	Soybean	nucleus	61.04	68.47
CDY23903	Canola	plastid	53.01	66.67
CDY67958	Canola	plastid	53.01	66.67
VIT_06s0004g07790.t01	Wine grape	cytosol	61.04	66.38
Bra000188.1-P	Field mustard	plastid	52.21	65.33
PGSC0003DMT400078265	Potato	cytosol, nucleus, plastid	57.83	64.86
GSMUA_AchrUn_...	Banana	plastid	47.79	64.67
Solyc06g082430.1.1	Tomato	cytosol, nucleus, plastid	60.24	64.66
GSMUA_Achr11P...	Banana	cytosol	56.22	64.52
PGSC0003DMT400052995	Potato	plastid	51.81	64.18
CDY06988	Canola	plastid	51.0	63.18
Bra016992.1-P	Field mustard	plastid	51.0	63.18
GSMUA_Achr5P07460_001	Banana	nucleus	52.21	62.2
Bra004572.1-P	Field mustard	cytosol, mitochondrion, nucleus	55.42	61.88
AT2G40470.1	Thale cress	cytosol, nucleus, plastid	55.02	61.16
Solyc06g007390.2.1	Tomato	nucleus	57.43	60.08
HORVU1Hr1G024490.1	Barley	cytosol, mitochondrion, nucleus	39.76	59.64
CDX93178	Canola	cytosol, nucleus, plastid	54.22	59.47
CDY24903	Canola	mitochondrion	54.22	58.44
GSMUA_Achr7P22200_001	Banana	nucleus	49.0	57.82
CDY07604	Canola	mitochondrion	53.82	57.76
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	22.49	51.85
Zm00001d009823_P001	Maize	plastid	45.38	51.6
KRH14912	Soybean	nucleus	30.92	50.33
Zm00001d043036_P001	Maize	cytosol	47.79	50.21
KRH73255	Soybean	mitochondrion, nucleus, plastid	30.92	50.0
TraesCS1D01G113100.1	Wheat	nucleus	46.99	49.79
KRH50484	Soybean	cytosol, nucleus, plastid	31.73	49.69
Os05t0165450-00	Rice	extracellular	49.4	49.6
TraesCS1B01G131900.2	Wheat	nucleus	46.59	48.95
KRG89441	Soybean	cytosol, nucleus, plastid	32.13	48.78
TraesCS1A01G111700.1	Wheat	nucleus	46.18	48.52
OQU87769	Sorghum	cytosol	47.79	47.79
TraesCS3D01G340000.1	Wheat	cytosol	46.99	47.18
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	32.13	47.06
KRG97685	Soybean	mitochondrion, nucleus	30.92	46.67
Os01t0825000-01	Rice	cytosol	46.99	46.61
KRG98217	Soybean	mitochondrion	32.13	46.51
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	31.73	46.47
TraesCS3A01G346300.1	Wheat	cytosol	46.59	46.4
KRH43747	Soybean	mitochondrion	32.93	46.33
KRH13706	Soybean	mitochondrion	32.53	45.51
KRH30173	Soybean	mitochondrion, nucleus	31.33	45.35
KRH56556	Soybean	nucleus, plastid	28.51	41.76
KRG93235	Soybean	plastid	27.71	41.07
OQU77508	Sorghum	cytosol, nucleus, plastid	50.2	40.72
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	29.32	40.11
KRH07170	Soybean	plastid	28.92	40.0
TraesCS3B01G378100.1	Wheat	plastid	46.59	39.73
KRH03242	Soybean	nucleus, plastid	30.12	39.68
KRH63606	Soybean	plastid	28.92	39.56
KRH10407	Soybean	mitochondrion	26.91	38.95
KRH54338	Soybean	plastid	28.92	38.92
KRH57118	Soybean	plastid	29.72	37.56
HORVU3Hr1G088440.1	Barley	plastid	47.39	35.76
KRH24932	Soybean	nucleus, plastid	28.51	35.15
KRH22937	Soybean	plastid	27.31	34.34
KRG89044	Soybean	nucleus, plastid	27.71	33.82
KRG91848	Soybean	plastid	29.72	33.33
KRH34918	Soybean	plastid	29.32	32.88
KRH20638	Soybean	nucleus	27.71	32.24
KRH62409	Soybean	nucleus	27.31	32.08
KRH13283	Soybean	nucleus	27.31	32.08
KRG88909	Soybean	nucleus	25.7	29.91
KRH53127	Soybean	nucleus	23.29	28.43
KRH57745	Soybean	nucleus	27.71	25.0
KRH76950	Soybean	nucleus	28.11	23.03
KRH28509	Soybean	nucleus	27.71	22.4

Protein Annotations

EMBL:ACUP02009056	EnsemblPlants:KRH17149	EnsemblPlantsGene:GLYMA_14G202300	EntrezGene:100813489	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF28	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH17149
ProteinID:KRH17149.1	ProteinID:KRH17150.1	ProteinID:KRH17151.1	ProteinID:KRH17152.1	SEG:seg	UniParc:UPI000233B572
UniProt:K7M865	MapMan:15.5.24	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:46758859..46759956

Molecular Weight (calculated)

26724.9 Da

IEP (calculated)

7.925

GRAVY (calculated)

-0.205

Length

249 amino acids

Sequence
(BLAST)

001: MFGHPETDRL DEIITTARAE EEASSQMGRK HFYGPTPGTT LNTVTPCAAC KLLRRRCAEE CPFSPYFSPH EPQKFAAVHK VFGASNVSKM LMEVPEGQRA
101: DAANSLVYEA NLRLRDPVYG CMGAISALQQ QVQTLQAELN AIRAEILKYK YREAASIISS QHVALVSSAD AISIAAIPAD SSQGLSQPHA HPHPPPPKPL
201: PSPLPKPLPS PSIILSSLSS SSASSVYTPP KSTMSLGSIS TTANVPYFV

Best Arabidopsis Sequence Match ( AT2G30340.2 )
(BLAST)

001: MIGNNREGFG EYYETVKKIK KDPAFETTTD HAVMGIRRHV AVPPGTTLNT VTPCAACKLL RRRCAEECPF SPYFSPHEPH KFAAVHKVFG ASNVSKMLLE
101: VGESQRGDAA NSLVYEANLR LRDPIYGCMG AISALQHHIQ SLQSELTTVR TEILRHKYQE ATTITSLQNN FNSTTTTSSV SCDQHALASA ILLPPPPPPP
201: PTPRPPRLLS SQPAPPPTPP VSLPSPSMVV SSSSSSNSSA TNSMYNPPPS STAGYSNSLS SDNNVHYFD

Arabidopsis Description

LBD13LBD13 [Source:UniProtKB/TrEMBL;Acc:A0A178VRU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.