Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64170 | Soybean | nucleus | 94.59 | 94.59 |
| VIT_13s0067g02380.t01 | Wine grape | nucleus | 83.78 | 83.04 |
| CDY67958 | Canola | plastid | 65.77 | 73.74 |
| CDY23903 | Canola | plastid | 65.32 | 73.23 |
| Bra004572.1-P | Field mustard | cytosol, mitochondrion, nucleus | 73.42 | 73.09 |
| AT2G40470.1 | Thale cress | cytosol, nucleus, plastid | 73.42 | 72.77 |
| Bra000188.1-P | Field mustard | plastid | 64.41 | 71.86 |
| CDX93178 | Canola | cytosol, nucleus, plastid | 73.42 | 71.81 |
| Bra016992.1-P | Field mustard | plastid | 63.06 | 69.65 |
| CDY06988 | Canola | plastid | 63.06 | 69.65 |
| GSMUA_Achr11P... | Banana | cytosol | 68.02 | 69.59 |
| GSMUA_Achr5P07460_001 | Banana | nucleus | 63.96 | 67.94 |
| GSMUA_Achr7P22200_001 | Banana | nucleus | 64.41 | 67.77 |
| GSMUA_AchrUn_... | Banana | plastid | 54.95 | 66.3 |
| CDY07604 | Canola | mitochondrion | 68.47 | 65.52 |
| CDY24903 | Canola | mitochondrion | 68.02 | 65.37 |
| HORVU1Hr1G024490.1 | Barley | cytosol, mitochondrion, nucleus | 47.75 | 63.86 |
| KRH72805 | Soybean | cytosol, mitochondrion, nucleus | 69.82 | 61.26 |
| KRH17149 | Soybean | cytosol, mitochondrion, nucleus | 68.47 | 61.04 |
| TraesCS1D01G113100.1 | Wheat | nucleus | 56.76 | 53.62 |
| Zm00001d043036_P001 | Maize | cytosol | 56.76 | 53.16 |
| KRH76093 | Soybean | cytosol, endoplasmic reticulum, nucleus | 25.68 | 52.78 |
| TraesCS1B01G131900.2 | Wheat | nucleus | 56.31 | 52.74 |
| TraesCS1A01G111700.1 | Wheat | nucleus | 55.86 | 52.32 |
| OQU87769 | Sorghum | cytosol | 58.56 | 52.21 |
| KRH14912 | Soybean | nucleus | 35.59 | 51.63 |
| TraesCS3D01G340000.1 | Wheat | cytosol | 57.66 | 51.61 |
| Zm00001d009823_P001 | Maize | plastid | 50.45 | 51.14 |
| KRH50484 | Soybean | cytosol, nucleus, plastid | 36.49 | 50.94 |
| KRH73255 | Soybean | mitochondrion, nucleus, plastid | 35.14 | 50.65 |
| KRG89441 | Soybean | cytosol, nucleus, plastid | 37.39 | 50.61 |
| TraesCS3A01G346300.1 | Wheat | cytosol | 56.76 | 50.4 |
| Os01t0825000-01 | Rice | cytosol | 56.76 | 50.2 |
| Os05t0165450-00 | Rice | extracellular | 55.86 | 50.0 |
| KRG97685 | Soybean | mitochondrion, nucleus | 36.49 | 49.09 |
| KRH11753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 36.94 | 48.24 |
| KRH36753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 36.94 | 48.24 |
| KRG98217 | Soybean | mitochondrion | 36.49 | 47.09 |
| KRH30173 | Soybean | mitochondrion, nucleus | 36.04 | 46.51 |
| KRH43747 | Soybean | mitochondrion | 36.49 | 45.76 |
| KRH13706 | Soybean | mitochondrion | 36.04 | 44.94 |
| TraesCS3B01G378100.1 | Wheat | plastid | 56.76 | 43.15 |
| KRG93235 | Soybean | plastid | 31.98 | 42.26 |
| OQU77508 | Sorghum | cytosol, nucleus, plastid | 58.11 | 42.02 |
| KRH56556 | Soybean | nucleus, plastid | 31.98 | 41.76 |
| KRH63606 | Soybean | plastid | 33.33 | 40.66 |
| KRH54338 | Soybean | plastid | 33.78 | 40.54 |
| KRH03242 | Soybean | nucleus, plastid | 33.78 | 39.68 |
| KRG94119 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 32.43 | 39.56 |
| KRH07170 | Soybean | plastid | 31.98 | 39.44 |
| KRH10407 | Soybean | mitochondrion | 30.18 | 38.95 |
| HORVU3Hr1G088440.1 | Barley | plastid | 57.21 | 38.48 |
| KRH57118 | Soybean | plastid | 33.78 | 38.07 |
| KRH22937 | Soybean | plastid | 30.63 | 34.34 |
| KRG89044 | Soybean | nucleus, plastid | 31.53 | 34.31 |
| KRH24932 | Soybean | nucleus, plastid | 30.63 | 33.66 |
| KRG88909 | Soybean | nucleus | 31.08 | 32.24 |
| KRH20638 | Soybean | nucleus | 30.18 | 31.31 |
| KRH62409 | Soybean | nucleus | 29.73 | 31.13 |
| KRH13283 | Soybean | nucleus | 29.73 | 31.13 |
| KRG91848 | Soybean | plastid | 31.08 | 31.08 |
| KRH34918 | Soybean | plastid | 30.18 | 30.18 |
| KRH53127 | Soybean | nucleus | 26.13 | 28.43 |
| KRH57745 | Soybean | nucleus | 34.23 | 27.54 |
| KRH76950 | Soybean | nucleus | 33.33 | 24.34 |
| KRH28509 | Soybean | nucleus | 32.88 | 23.7 |
Protein Annotations
| EMBL:ACUP02003486 | EnsemblPlants:KRH53776 | EnsemblPlantsGene:GLYMA_06G145400 | EntrezGene:100790799 | InterPro:IPR004883 | InterPro:LOB |
| ncoils:Coil | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF2 | PFAM:PF03195 | PFscan:PS50891 | PRINTS:PR00049 |
| ProteinID:KRH53776 | ProteinID:KRH53776.1 | SEG:seg | UniParc:UPI000233A158 | UniProt:I1KBA6 | MapMan:15.5.24 |
Description
hypothetical protein
Coordinates
chr6:-:11863498..11865699
Molecular Weight (calculated)
24401.4 Da
IEP (calculated)
9.245
GRAVY (calculated)
-0.436
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRERERFDE IGKKIKRERD VSSQMGRRHM LGPPGTLNTI TPCAACKLLR RRCAQECPFS PYFSPHEPQK FASVHKVFGA SNVSKMLMEV PECQRADAAN
101: SLVYEANVRL RDPVYGCMGA ISALQQQVQS LQAELNAVRG EILKYKLREA NMIPSSHHVG MLPSSGAVSI AAPPPPPPPP PPPPPPPSLP LPLTSPSSSI
201: YIQHRDPTTY TTISSDNISY FG
101: SLVYEANVRL RDPVYGCMGA ISALQQQVQS LQAELNAVRG EILKYKLREA NMIPSSHHVG MLPSSGAVSI AAPPPPPPPP PPPPPPPSLP LPLTSPSSSI
201: YIQHRDPTTY TTISSDNISY FG
001: MSRERERFEE IGKKIKREAD AWPHQMAGIR RPMSGPPGTL NTITPCAACK LLRRRCAQEC PFSPYFSPHE PHKFASVHKV FGASNVSKML MEVPESQRAD
101: AANSLVYEAN VRLRDPVYGC MGAISALQQQ VQALQAELTA VRSEILKYKQ REAVATLIVP SNSQVAGFHN SGGVSVIAPP PQRPTTPPQP TTAHPPSPSS
201: CVFSQPTTRD LEYGNIESEN NYFG
101: AANSLVYEAN VRLRDPVYGC MGAISALQQQ VQALQAELTA VRSEILKYKQ REAVATLIVP SNSQVAGFHN SGGVSVIAPP PQRPTTPPQP TTAHPPSPSS
201: CVFSQPTTRD LEYGNIESEN NYFG
Arabidopsis Description
LBD15LOB domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5T5]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.