CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	95.88	95.88
KRH50484	Soybean	cytosol, nucleus, plastid	80.59	86.16
KRG89441	Soybean	cytosol, nucleus, plastid	80.59	83.54
Bra014907.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	78.82	77.91
AT1G31320.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	78.82	77.91
CDY50718	Canola	cytosol, mitochondrion, nucleus, plastid	78.82	77.91
CDX77553	Canola	cytosol, mitochondrion, nucleus, plastid	78.82	77.91
VIT_00s0125g00290.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	77.06	74.86
KRH43747	Soybean	mitochondrion	72.94	70.06
PGSC0003DMT400054637	Potato	cytosol, nucleus, plastid	65.88	69.57
Solyc02g069440.2.1	Tomato	nucleus	65.29	68.94
KRH13706	Soybean	mitochondrion	71.18	67.98
GSMUA_Achr5P02190_001	Banana	mitochondrion	57.65	59.04
KRH14912	Soybean	nucleus	52.35	58.17
KRH73255	Soybean	mitochondrion, nucleus, plastid	52.35	57.79
GSMUA_Achr2P13170_001	Banana	nucleus	56.47	55.17
GSMUA_Achr7P00880_001	Banana	cytosol, nucleus, plastid	60.0	54.84
KRG97685	Soybean	mitochondrion, nucleus	52.94	54.55
GSMUA_Achr4P32000_001	Banana	cytosol, mitochondrion, nucleus, plastid	58.24	54.4
TraesCS4B01G016200.1	Wheat	plastid	55.88	54.29
TraesCS4A01G297500.1	Wheat	plastid	54.71	53.76
HORVU4Hr1G002480.2	Barley	cytosol	55.29	52.81
KRG98217	Soybean	mitochondrion	52.94	52.33
KRH30173	Soybean	mitochondrion, nucleus	52.35	51.74
Zm00001d013625_P001	Maize	cytosol, mitochondrion, nucleus, plastid	60.0	51.26
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	32.35	50.93
EER93717	Sorghum	plastid	60.59	49.76
Zm00001d033466_P001	Maize	plastid	58.24	46.92
KRH10407	Soybean	mitochondrion	45.29	44.77
KRH56556	Soybean	nucleus, plastid	42.94	42.94
KRG93235	Soybean	plastid	42.35	42.86
KRH63606	Soybean	plastid	44.71	41.76
KRH54338	Soybean	plastid	44.71	41.08
KRH07170	Soybean	plastid	42.35	40.0
KRH03242	Soybean	nucleus, plastid	44.12	39.68
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	41.76	39.01
KRH22937	Soybean	plastid	45.29	38.89
KRH24932	Soybean	nucleus, plastid	45.88	38.61
KRH57118	Soybean	plastid	44.12	38.07
KRH53776	Soybean	nucleus	48.24	36.94
KRH64170	Soybean	nucleus	48.24	36.94
KRG89044	Soybean	nucleus, plastid	44.12	36.76
KRH34918	Soybean	plastid	45.88	35.14
KRG91848	Soybean	plastid	45.88	35.14
KRH13283	Soybean	nucleus	42.35	33.96
KRH20638	Soybean	nucleus	42.35	33.64
KRH62409	Soybean	nucleus	41.18	33.02
KRG88909	Soybean	nucleus	41.18	32.71
TraesCS4D01G014600.1	Wheat	nucleus	55.29	31.97
KRH17149	Soybean	cytosol, mitochondrion, nucleus	46.47	31.73
KRH72805	Soybean	cytosol, mitochondrion, nucleus	47.06	31.62
KRH53127	Soybean	nucleus	36.47	30.39
KRH57745	Soybean	nucleus	44.12	27.17
KRH76950	Soybean	nucleus	44.12	24.67
KRH28509	Soybean	nucleus	44.12	24.35

Protein Annotations

EMBL:ACUP02009232	EnsemblPlants:KRH11753	EnsemblPlantsGene:GLYMA_15G127900	EntrezGene:100786743	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF7	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH11753
ProteinID:KRH11753.1	SEG:seg	UniParc:UPI000233AD4C	UniProt:I1MG13	MapMan:15.5.24	:

Description

hypothetical protein

Coordinates

chr15:+:10181454..10186621

Molecular Weight (calculated)

18651.3 Da

IEP (calculated)

9.083

GRAVY (calculated)

-0.360

Length

170 amino acids

Sequence
(BLAST)

001: MKEGGGRKQG AASPCAACKL LRRRCAQDCV FAPYFPADEP QKFANVHKVF GASNVNKMLQ DLPMHQRGDA VSSMVYEANA RVRDPVYGCV GAISSLQQQI
101: DVLQTQLALA QAEVAHLRAR QNRCFSHHGL RPTSPTTSGF PSSKTLDSHA KPIFDIDMVD QVRYGASMWS

Best Arabidopsis Sequence Match ( AT1G31320.1 )
(BLAST)

001: MKESSRKQGA ASPCAACKLL RRRCAQDCVF SPYFPADEPQ KFANVHRVFG ASNVNKMLQE LPIHQRGDAV SSMVYEANAR VRDPVYGCVG AISSLQQQID
101: VLQAQLALAQ AEVVHLRVRQ STNFPGHGLC PDSPSSSGSP SSKQVSPQDN KGMFSHMDIV DEASLGESMW SC

Arabidopsis Description

LBD4LOB domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHE9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.