CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63606	Soybean	plastid	92.43	93.96
KRH03242	Soybean	nucleus, plastid	84.32	82.54
KRH57118	Soybean	plastid	83.24	78.17
VIT_17s0000g09010.t01	Wine grape	plastid	75.14	75.54
PGSC0003DMT400046644	Potato	nucleus, plastid	72.43	70.16
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	40.54	69.44
PGSC0003DMT400069646	Potato	plastid	63.78	67.43
Solyc03g112430.1.1	Tomato	nucleus, plastid	71.35	67.35
KRG93235	Soybean	plastid	58.92	64.88
KRH56556	Soybean	nucleus, plastid	58.92	64.12
CDY16738	Canola	plastid	60.54	63.64
CDY48125	Canola	plastid	60.54	63.64
Bra038606.1-P	Field mustard	plastid	61.08	62.43
CDY68853	Canola	plastid	61.08	62.43
CDY69697	Canola	plastid	61.08	62.43
Bra035860.1-P	Field mustard	plastid	58.38	61.36
KRH07170	Soybean	plastid	58.92	60.56
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	58.92	59.89
AT5G63090.3	Thale cress	plastid	59.46	59.14
Solyc06g071660.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	64.32	58.62
KRH73255	Soybean	mitochondrion, nucleus, plastid	41.08	49.35
KRH50484	Soybean	cytosol, nucleus, plastid	42.16	49.06
KRH14912	Soybean	nucleus	40.54	49.02
KRG97685	Soybean	mitochondrion, nucleus	42.7	47.88
KRG89441	Soybean	cytosol, nucleus, plastid	42.16	47.56
Os01t0169400-01	Rice	plastid	61.08	45.02
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	41.08	44.71
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	41.08	44.71
KRH13283	Soybean	nucleus	50.81	44.34
KRH20638	Soybean	nucleus	50.81	43.93
Zm00001d039694_P001	Maize	plastid	61.08	43.3
KRH13706	Soybean	mitochondrion	41.62	43.26
KRG98217	Soybean	mitochondrion	40.0	43.02
KRH30173	Soybean	mitochondrion, nucleus	39.46	42.44
TraesCS3D01G093500.1	Wheat	plastid	58.92	42.41
TraesCS3B01G108500.1	Wheat	plastid	58.92	42.41
TraesCS3A01G093200.1	Wheat	plastid	58.92	42.41
KRH43747	Soybean	mitochondrion	40.54	42.37
EES00235	Sorghum	plastid	61.08	42.16
KRG88909	Soybean	nucleus	47.03	40.65
HORVU3Hr1G016690.1	Barley	plastid	59.46	39.71
KRH62409	Soybean	nucleus	44.32	38.68
KRH10407	Soybean	mitochondrion	34.05	36.63
KRH53127	Soybean	nucleus	39.46	35.78
KRH53776	Soybean	nucleus	40.54	33.78
KRH64170	Soybean	nucleus	40.0	33.33
KRG89044	Soybean	nucleus, plastid	36.76	33.33
KRH24932	Soybean	nucleus, plastid	35.68	32.67
KRH22937	Soybean	plastid	34.59	32.32
KRH57745	Soybean	nucleus	44.32	29.71
KRH17149	Soybean	cytosol, mitochondrion, nucleus	38.92	28.92
KRH34918	Soybean	plastid	34.59	28.83
KRH76950	Soybean	nucleus	47.03	28.62
KRH72805	Soybean	cytosol, mitochondrion, nucleus	38.92	28.46
KRG91848	Soybean	plastid	34.05	28.38
KRH28509	Soybean	nucleus	47.03	28.25

Protein Annotations

EMBL:ACUP02003514	EnsemblPlants:KRH54338	EnsemblPlantsGene:GLYMA_06G178900	EntrezGene:100799774	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF35	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH54337.1
ProteinID:KRH54338	ProteinID:KRH54338.1	ProteinID:KRH54339.1	SEG:seg	UniParc:UPI000233AA64	UniProt:K7KVP4
MapMan:15.5.24	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:15178190..15180972

Molecular Weight (calculated)

20349.9 Da

IEP (calculated)

7.206

GRAVY (calculated)

-0.457

Length

185 amino acids

Sequence
(BLAST)

001: MASSSSYNSP CAACKFLRRK CLPGCIFAPY FPPEEPQKFA NVHKIFGASN VTKLLNELLP HQREDAVNSL AYEAEARVRD PVYGCVGAIS FLQRQVQRLQ
101: KELDSANADL LRYACNDMPP PSLSVPPQMP QRSFIARFGN ESASGGGFYR PSPTTTTTTY SFPYSLPWTD SEDINDRGGE GGGNL

Best Arabidopsis Sequence Match ( AT3G27650.1 )
(BLAST)

001: MPKRETKKIK PSQEVIKEGP FLVAIHLKGI YMSNYTNSPC AACKFLRRKC TSDCVFAPYF PPEEPTKFAN VHRIFGASNV SKILHEVAPH QREDAVNSLA
101: YEAEARLKDP VYGCVGAISV LQRQVLRLQR ELEETNADLM RYAGCLGGET TSAYGGRRG

Arabidopsis Description

LBD25LOB domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.