Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G093200.1 | Wheat | plastid | 88.45 | 95.33 |
| TraesCS3B01G108500.1 | Wheat | plastid | 88.45 | 95.33 |
| TraesCS3D01G093500.1 | Wheat | plastid | 88.09 | 94.94 |
| Os01t0169400-01 | Rice | plastid | 72.56 | 80.08 |
| Zm00001d039694_P001 | Maize | plastid | 71.12 | 75.48 |
| EES00235 | Sorghum | plastid | 71.12 | 73.51 |
| Bra039072.1-P | Field mustard | plastid | 31.77 | 67.18 |
| CDY20041 | Canola | plastid | 31.41 | 66.41 |
| Solyc02g067800.2.1 | Tomato | plastid | 39.71 | 65.48 |
| Bra025294.1-P | Field mustard | plastid | 31.05 | 65.15 |
| CDY13730 | Canola | plastid | 31.05 | 65.15 |
| PGSC0003DMT400017805 | Potato | plastid | 39.35 | 64.88 |
| CDY49773 | Canola | plastid | 30.69 | 64.39 |
| CDX83724 | Canola | plastid | 30.69 | 64.39 |
| KRH56556 | Soybean | nucleus, plastid | 39.35 | 64.12 |
| KRH76093 | Soybean | cytosol, endoplasmic reticulum, nucleus | 24.91 | 63.89 |
| PGSC0003DMT400032875 | Potato | plastid | 36.1 | 63.69 |
| KRG93235 | Soybean | plastid | 38.63 | 63.69 |
| CDY03987 | Canola | plastid | 30.32 | 63.64 |
| Bra033019.1-P | Field mustard | plastid | 30.32 | 63.64 |
| Solyc02g086480.1.1 | Tomato | plastid | 33.94 | 63.09 |
| KRH07170 | Soybean | plastid | 39.71 | 61.11 |
| VIT_14s0066g00680.t01 | Wine grape | nucleus, plastid | 37.18 | 60.59 |
| VIT_17s0000g09010.t01 | Wine grape | plastid | 39.71 | 59.78 |
| KRH54338 | Soybean | plastid | 39.71 | 59.46 |
| KRH63606 | Soybean | plastid | 38.99 | 59.34 |
| KRG94119 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 38.63 | 58.79 |
| PGSC0003DMT400046644 | Potato | nucleus, plastid | 40.43 | 58.64 |
| CDY48125 | Canola | plastid | 37.18 | 58.52 |
| CDY16738 | Canola | plastid | 37.18 | 58.52 |
| Bra038606.1-P | Field mustard | plastid | 37.91 | 58.01 |
| CDY69697 | Canola | plastid | 37.91 | 58.01 |
| CDY68853 | Canola | plastid | 37.91 | 58.01 |
| KRH03242 | Soybean | nucleus, plastid | 38.99 | 57.14 |
| PGSC0003DMT400069646 | Potato | plastid | 36.1 | 57.14 |
| Solyc03g112430.1.1 | Tomato | nucleus, plastid | 40.43 | 57.14 |
| Bra035860.1-P | Field mustard | plastid | 36.1 | 56.82 |
| AT5G63090.3 | Thale cress | plastid | 36.82 | 54.84 |
| KRH57118 | Soybean | plastid | 38.99 | 54.82 |
| AT3G27650.1 | Thale cress | cytosol, nucleus, plastid | 31.41 | 54.72 |
| Solyc06g071660.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 36.1 | 49.26 |
| HORVU4Hr1G002480.2 | Barley | cytosol | 27.08 | 42.13 |
| HORVU5Hr1G047610.1 | Barley | plastid | 26.35 | 41.24 |
| HORVU1Hr1G024490.1 | Barley | cytosol, mitochondrion, nucleus | 23.1 | 38.55 |
| HORVU1Hr1G060290.2 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 28.16 | 33.48 |
| HORVU1Hr1G064640.3 | Barley | plastid | 33.57 | 33.45 |
| HORVU3Hr1G090250.5 | Barley | plastid | 32.49 | 33.33 |
| HORVU3Hr1G090240.2 | Barley | plastid | 32.49 | 33.33 |
| HORVU1Hr1G012720.1 | Barley | cytosol, plastid | 25.63 | 33.02 |
| HORVU4Hr1G056890.2 | Barley | plastid | 23.83 | 29.46 |
| HORVU4Hr1G013630.2 | Barley | nucleus | 30.69 | 28.24 |
| HORVU3Hr1G088440.1 | Barley | plastid | 25.27 | 21.21 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G016690.1 | EnsemblPlantsGene:HORVU3Hr1G016690 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF35 | PFAM:PF03195 | PFscan:PS50891 | SEG:seg | UniParc:UPI000B478BB4 | UniProt:A0A287K913 |
| MapMan:15.5.24 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:40939172..40942205
Molecular Weight (calculated)
28755.5 Da
IEP (calculated)
8.210
GRAVY (calculated)
0.024
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNHLTALLN SHIYIRRSPA MASPSSTGNS IVSVVVAAAT TPGAGAPCAA CKFLRRKCLP GCVFAPYFPP EEPQKFANVH KVFGASNVTK LLNELPPHQR
101: EDAVSSLAYE AEARVKDPVY GCVGAISVLQ RQVHRLQKEL DAAHTELLRY ACGELGSIPT ALPVVTAGVP SGRLSSAVMP CPGQLAGGMY SGGGGGGFRR
201: LGLVDAIVPQ PPLSAGCYYN MRSNNNAGGS VAADVAPVQI PYASMANWAV NAISTITTTS GSESIGMDHK EGGDSSM
101: EDAVSSLAYE AEARVKDPVY GCVGAISVLQ RQVHRLQKEL DAAHTELLRY ACGELGSIPT ALPVVTAGVP SGRLSSAVMP CPGQLAGGMY SGGGGGGFRR
201: LGLVDAIVPQ PPLSAGCYYN MRSNNNAGGS VAADVAPVQI PYASMANWAV NAISTITTTS GSESIGMDHK EGGDSSM
001: MASSSNSYNS PCAACKFLRR KCMPGCIFAP YFPPEEPHKF ANVHKIFGAS NVTKLLNELL PHQREDAVNS LAYEAEARVR DPVYGCVGAI SYLQRQVHRL
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
Arabidopsis Description
LOBLOB [Source:UniProtKB/TrEMBL;Acc:A0A178UKE6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.