Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025294.1-P | Field mustard | plastid | 96.97 | 96.97 |
| CDY13730 | Canola | plastid | 96.97 | 96.97 |
| CDY20041 | Canola | plastid | 90.15 | 90.84 |
| CDY49773 | Canola | plastid | 90.15 | 90.15 |
| CDY03987 | Canola | plastid | 87.88 | 87.88 |
| AT3G27650.1 | Thale cress | cytosol, nucleus, plastid | 90.15 | 74.84 |
| KRH76093 | Soybean | cytosol, endoplasmic reticulum, nucleus | 56.06 | 68.52 |
| Solyc02g086480.1.1 | Tomato | plastid | 67.42 | 59.73 |
| KRG93235 | Soybean | plastid | 74.24 | 58.33 |
| PGSC0003DMT400032875 | Potato | plastid | 68.94 | 57.96 |
| KRH56556 | Soybean | nucleus, plastid | 74.24 | 57.65 |
| Solyc02g067800.2.1 | Tomato | plastid | 70.45 | 55.36 |
| PGSC0003DMT400017805 | Potato | plastid | 68.94 | 54.17 |
| VIT_14s0066g00680.t01 | Wine grape | nucleus, plastid | 69.7 | 54.12 |
| KRH07170 | Soybean | plastid | 72.73 | 53.33 |
| KRG94119 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 72.73 | 52.75 |
| CDY48125 | Canola | plastid | 68.94 | 51.7 |
| CDY16738 | Canola | plastid | 68.94 | 51.7 |
| CDY51008 | Canola | mitochondrion | 53.03 | 50.36 |
| CDY68853 | Canola | plastid | 68.94 | 50.28 |
| CDY69697 | Canola | plastid | 68.94 | 50.28 |
| CDY72536 | Canola | mitochondrion | 51.52 | 49.28 |
| CDY40054 | Canola | mitochondrion | 53.03 | 42.94 |
| CDY66794 | Canola | mitochondrion | 52.27 | 42.33 |
| CDY50999 | Canola | cytosol, mitochondrion, plastid | 52.27 | 42.07 |
| CDX77553 | Canola | cytosol, mitochondrion, nucleus, plastid | 54.55 | 41.86 |
| CDX81767 | Canola | cytosol, nucleus, plastid | 51.52 | 41.46 |
| CDY50718 | Canola | cytosol, mitochondrion, nucleus, plastid | 53.79 | 41.28 |
| CDY16414 | Canola | nucleus, plastid | 61.36 | 40.1 |
| CDY46781 | Canola | nucleus, plastid | 61.36 | 40.1 |
| CDY10714 | Canola | mitochondrion | 53.79 | 37.57 |
| CDY24027 | Canola | mitochondrion | 52.27 | 36.7 |
| CDY06285 | Canola | nucleus, plastid | 51.52 | 35.79 |
| CDY67958 | Canola | plastid | 53.03 | 35.35 |
| CDY23903 | Canola | plastid | 53.03 | 35.35 |
| CDY22713 | Canola | plastid | 50.76 | 35.08 |
| Os01t0169400-01 | Rice | plastid | 65.91 | 34.66 |
| TraesCS3D01G093500.1 | Wheat | plastid | 64.39 | 33.07 |
| TraesCS3B01G108500.1 | Wheat | plastid | 64.39 | 33.07 |
| TraesCS3A01G093200.1 | Wheat | plastid | 64.39 | 33.07 |
| CDY06988 | Canola | plastid | 50.0 | 32.84 |
| Zm00001d039694_P001 | Maize | plastid | 64.39 | 32.57 |
| CDX93178 | Canola | cytosol, nucleus, plastid | 54.55 | 31.72 |
| EES00235 | Sorghum | plastid | 64.39 | 31.72 |
| HORVU3Hr1G016690.1 | Barley | plastid | 64.39 | 30.69 |
| CDY04570 | Canola | plastid | 50.0 | 30.28 |
| CDY31207 | Canola | plastid | 49.24 | 30.09 |
| CDY62454 | Canola | plastid | 49.24 | 29.95 |
| CDY15755 | Canola | plastid | 49.24 | 29.95 |
| CDX77182 | Canola | plastid | 49.24 | 29.95 |
| CDX93609 | Canola | nucleus | 50.76 | 29.78 |
| CDY07604 | Canola | mitochondrion | 52.27 | 29.74 |
| CDY24903 | Canola | mitochondrion | 51.52 | 29.44 |
| CDX95115 | Canola | plastid | 50.76 | 29.39 |
| CDY10726 | Canola | mitochondrion | 50.76 | 28.39 |
| CDY02059 | Canola | mitochondrion | 50.76 | 28.39 |
| CDX83290 | Canola | plastid | 48.48 | 27.71 |
| CDY49845 | Canola | nucleus, plastid | 58.33 | 24.68 |
| CDY52150 | Canola | nucleus, plastid | 57.58 | 24.05 |
| CDY12784 | Canola | nucleus, plastid | 57.58 | 22.62 |
| CDY01457 | Canola | nucleus, plastid | 57.58 | 22.49 |
| CDX89590 | Canola | mitochondrion, nucleus | 51.52 | 22.08 |
| CDX68120 | Canola | mitochondrion, nucleus | 51.52 | 22.08 |
| CDY18621 | Canola | nucleus, plastid | 48.48 | 21.12 |
| CDX81360 | Canola | plastid | 50.76 | 20.0 |
Protein Annotations
| EnsemblPlants:CDX83724 | EnsemblPlantsGene:GSBRNA2T00139440001 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF12 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:CDX83724 | ProteinID:CDX83724.1 | UniParc:UPI0004EEC208 |
| MapMan:15.5.24 | : | : | : | : | : |
Description
BnaC07g24640D
Coordinates
chrLK031833:+:1851342..1853861
Molecular Weight (calculated)
14690.4 Da
IEP (calculated)
7.769
GRAVY (calculated)
-0.398
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSYSNYTN SPCAACKFLR RKCTSDCVFA PYFPPEEPKK FANVHRIFGA SNVSKILQEV EPHQREDAVN SLAYEAEARL RDPVYGCVGA ISVLQRQVLG
101: LQRELEETNA DIMRYASCLG GETTSVYGAR RG
101: LQRELEETNA DIMRYASCLG GETTSVYGAR RG
001: MPKRETKKIK PSQEVIKEGP FLVAIHLKGI YMSNYTNSPC AACKFLRRKC TSDCVFAPYF PPEEPTKFAN VHRIFGASNV SKILHEVAPH QREDAVNSLA
101: YEAEARLKDP VYGCVGAISV LQRQVLRLQR ELEETNADLM RYAGCLGGET TSAYGGRRG
101: YEAEARLKDP VYGCVGAISV LQRQVLRLQR ELEETNADLM RYAGCLGGET TSAYGGRRG
Arabidopsis Description
LBD25LOB domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q3]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.