Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G108500.1 | Wheat | plastid | 99.61 | 99.61 |
| TraesCS3A01G093200.1 | Wheat | plastid | 98.83 | 98.83 |
| HORVU3Hr1G016690.1 | Barley | plastid | 94.94 | 88.09 |
| Os01t0169400-01 | Rice | plastid | 78.21 | 80.08 |
| Zm00001d039694_P001 | Maize | plastid | 76.65 | 75.48 |
| EES00235 | Sorghum | plastid | 76.65 | 73.51 |
| Bra039072.1-P | Field mustard | plastid | 34.24 | 67.18 |
| CDY20041 | Canola | plastid | 33.85 | 66.41 |
| CDY13730 | Canola | plastid | 33.46 | 65.15 |
| Bra025294.1-P | Field mustard | plastid | 33.46 | 65.15 |
| CDX83724 | Canola | plastid | 33.07 | 64.39 |
| CDY49773 | Canola | plastid | 33.07 | 64.39 |
| Solyc02g067800.2.1 | Tomato | plastid | 42.02 | 64.29 |
| PGSC0003DMT400017805 | Potato | plastid | 42.02 | 64.29 |
| KRH76093 | Soybean | cytosol, endoplasmic reticulum, nucleus | 26.85 | 63.89 |
| PGSC0003DMT400032875 | Potato | plastid | 38.91 | 63.69 |
| Bra033019.1-P | Field mustard | plastid | 32.68 | 63.64 |
| CDY03987 | Canola | plastid | 32.68 | 63.64 |
| KRH56556 | Soybean | nucleus, plastid | 42.02 | 63.53 |
| Solyc02g086480.1.1 | Tomato | plastid | 36.58 | 63.09 |
| KRG93235 | Soybean | plastid | 40.86 | 62.5 |
| VIT_14s0066g00680.t01 | Wine grape | nucleus, plastid | 40.86 | 61.76 |
| VIT_17s0000g09010.t01 | Wine grape | plastid | 42.8 | 59.78 |
| KRH07170 | Soybean | plastid | 41.63 | 59.44 |
| CDY48125 | Canola | plastid | 40.47 | 59.09 |
| CDY16738 | Canola | plastid | 40.47 | 59.09 |
| KRH54338 | Soybean | plastid | 42.41 | 58.92 |
| KRH63606 | Soybean | plastid | 41.63 | 58.79 |
| PGSC0003DMT400046644 | Potato | nucleus, plastid | 43.58 | 58.64 |
| Bra038606.1-P | Field mustard | plastid | 40.86 | 58.01 |
| CDY68853 | Canola | plastid | 40.86 | 58.01 |
| CDY69697 | Canola | plastid | 40.86 | 58.01 |
| KRG94119 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 40.86 | 57.69 |
| Bra035860.1-P | Field mustard | plastid | 39.3 | 57.39 |
| Solyc03g112430.1.1 | Tomato | nucleus, plastid | 43.58 | 57.14 |
| KRH03242 | Soybean | nucleus, plastid | 41.63 | 56.61 |
| PGSC0003DMT400069646 | Potato | plastid | 38.13 | 56.0 |
| AT5G63090.3 | Thale cress | plastid | 39.69 | 54.84 |
| AT3G27650.1 | Thale cress | cytosol, nucleus, plastid | 33.85 | 54.72 |
| KRH57118 | Soybean | plastid | 41.63 | 54.31 |
| Solyc06g071660.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 38.13 | 48.28 |
| TraesCS5D01G157400.1 | Wheat | plastid | 28.79 | 41.81 |
| TraesCS1D01G224000.1 | Wheat | mitochondrion | 29.96 | 40.74 |
| TraesCS3D01G397200.1 | Wheat | plastid | 35.41 | 35.14 |
| TraesCS1D01G259900.1 | Wheat | plastid | 35.8 | 34.98 |
| TraesCS2D01G008400.1 | Wheat | plastid | 27.63 | 33.02 |
| TraesCS4D01G078800.1 | Wheat | mitochondrion, nucleus, plastid | 33.46 | 30.28 |
| TraesCS1D01G113100.1 | Wheat | nucleus | 27.24 | 29.79 |
| TraesCS4D01G197400.1 | Wheat | plastid | 25.68 | 29.6 |
| TraesCS3D01G340000.1 | Wheat | cytosol | 28.02 | 29.03 |
| TraesCS4D01G014600.1 | Wheat | nucleus | 29.57 | 25.85 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G093500.1 | EnsemblPlantsGene:TraesCS3D01G093500 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF35 | PFAM:PF03195 | PFscan:PS50891 | SEG:seg | MapMan:15.5.24 | : |
Description
No Description!
Coordinates
chr3D:+:47493516..47494289
Molecular Weight (calculated)
26461.7 Da
IEP (calculated)
7.719
GRAVY (calculated)
0.048
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPSSTGNS AVSVVVAAPT TPGAGAPCAA CKFLRRKCLP GCVFAPYFPP EEPQKFANVH KVFGASNVTK LLNELPPHQR EDAVSSLAYE AEARVKDPVY
101: GCVGAISVLQ RQVHRLQKEL DAAHTELLRY ACGELGGIPT ALPVVTASIP TGRLSSAAMP CPGQLAGGMY GGGSGGGFRR LGLVDAIVPQ PPLSAGCFYN
201: MRSSNNAGGS VAAEVAPVQI PYASMANWAV NAISTITTTS GSESIVMDHK EGGDSSM
101: GCVGAISVLQ RQVHRLQKEL DAAHTELLRY ACGELGGIPT ALPVVTASIP TGRLSSAAMP CPGQLAGGMY GGGSGGGFRR LGLVDAIVPQ PPLSAGCFYN
201: MRSSNNAGGS VAAEVAPVQI PYASMANWAV NAISTITTTS GSESIVMDHK EGGDSSM
001: MASSSNSYNS PCAACKFLRR KCMPGCIFAP YFPPEEPHKF ANVHKIFGAS NVTKLLNELL PHQREDAVNS LAYEAEARVR DPVYGCVGAI SYLQRQVHRL
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
Arabidopsis Description
LOBLOB [Source:UniProtKB/TrEMBL;Acc:A0A178UKE6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.