Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16738 | Canola | plastid | 97.16 | 97.16 |
| CDY68853 | Canola | plastid | 93.75 | 91.16 |
| Bra038606.1-P | Field mustard | plastid | 93.18 | 90.61 |
| CDY69697 | Canola | plastid | 93.18 | 90.61 |
| AT5G63090.3 | Thale cress | plastid | 91.48 | 86.56 |
| CDY20041 | Canola | plastid | 51.7 | 69.47 |
| CDX83724 | Canola | plastid | 51.7 | 68.94 |
| CDY03987 | Canola | plastid | 51.7 | 68.94 |
| CDY49773 | Canola | plastid | 51.7 | 68.94 |
| CDY13730 | Canola | plastid | 51.14 | 68.18 |
| VIT_17s0000g09010.t01 | Wine grape | plastid | 67.05 | 64.13 |
| PGSC0003DMT400069646 | Potato | plastid | 60.8 | 61.14 |
| KRH54338 | Soybean | plastid | 63.64 | 60.54 |
| KRH03242 | Soybean | nucleus, plastid | 64.77 | 60.32 |
| PGSC0003DMT400046644 | Potato | nucleus, plastid | 65.34 | 60.21 |
| KRH63606 | Soybean | plastid | 61.93 | 59.89 |
| KRH57118 | Soybean | plastid | 64.77 | 57.87 |
| Solyc03g112430.1.1 | Tomato | nucleus, plastid | 64.2 | 57.65 |
| CDY51008 | Canola | mitochondrion | 42.61 | 53.96 |
| CDY72536 | Canola | mitochondrion | 42.05 | 53.62 |
| Solyc06g071660.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 60.23 | 52.22 |
| CDY40054 | Canola | mitochondrion | 43.18 | 46.63 |
| CDY66794 | Canola | mitochondrion | 43.18 | 46.63 |
| CDY16414 | Canola | nucleus, plastid | 52.27 | 45.54 |
| CDY46781 | Canola | nucleus, plastid | 52.27 | 45.54 |
| CDX77553 | Canola | cytosol, mitochondrion, nucleus, plastid | 44.32 | 45.35 |
| CDX81767 | Canola | cytosol, nucleus, plastid | 42.05 | 45.12 |
| CDY50718 | Canola | cytosol, mitochondrion, nucleus, plastid | 43.75 | 44.77 |
| CDY50999 | Canola | cytosol, mitochondrion, plastid | 41.48 | 44.51 |
| Os01t0169400-01 | Rice | plastid | 59.66 | 41.83 |
| TraesCS3B01G108500.1 | Wheat | plastid | 59.09 | 40.47 |
| TraesCS3D01G093500.1 | Wheat | plastid | 59.09 | 40.47 |
| TraesCS3A01G093200.1 | Wheat | plastid | 58.52 | 40.08 |
| Zm00001d039694_P001 | Maize | plastid | 59.09 | 39.85 |
| CDY10714 | Canola | mitochondrion | 42.61 | 39.68 |
| CDY24027 | Canola | mitochondrion | 42.05 | 39.36 |
| EES00235 | Sorghum | plastid | 59.09 | 38.81 |
| HORVU3Hr1G016690.1 | Barley | plastid | 58.52 | 37.18 |
| CDY06285 | Canola | nucleus, plastid | 39.77 | 36.84 |
| CDY22713 | Canola | plastid | 39.2 | 36.13 |
| CDY23903 | Canola | plastid | 40.34 | 35.86 |
| CDY67958 | Canola | plastid | 40.34 | 35.86 |
| CDY06988 | Canola | plastid | 39.2 | 34.33 |
| CDX93178 | Canola | cytosol, nucleus, plastid | 41.48 | 32.16 |
| CDY07604 | Canola | mitochondrion | 40.91 | 31.03 |
| CDY31207 | Canola | plastid | 38.07 | 31.02 |
| CDX77182 | Canola | plastid | 38.07 | 30.88 |
| CDY62454 | Canola | plastid | 38.07 | 30.88 |
| CDY15755 | Canola | plastid | 38.07 | 30.88 |
| CDY24903 | Canola | mitochondrion | 40.34 | 30.74 |
| CDY04570 | Canola | plastid | 38.07 | 30.73 |
| CDX93609 | Canola | nucleus | 39.2 | 30.67 |
| CDX95115 | Canola | plastid | 39.2 | 30.26 |
| CDX83290 | Canola | plastid | 36.93 | 28.14 |
| CDY49845 | Canola | nucleus, plastid | 48.86 | 27.56 |
| CDY52150 | Canola | nucleus, plastid | 48.3 | 26.9 |
| CDY10726 | Canola | mitochondrion | 35.8 | 26.69 |
| CDY02059 | Canola | mitochondrion | 35.8 | 26.69 |
| CDX89590 | Canola | mitochondrion, nucleus | 45.45 | 25.97 |
| CDX68120 | Canola | mitochondrion, nucleus | 45.45 | 25.97 |
| CDY12784 | Canola | nucleus, plastid | 47.73 | 25.0 |
| CDY01457 | Canola | nucleus, plastid | 47.73 | 24.85 |
| CDY18621 | Canola | nucleus, plastid | 40.91 | 23.76 |
| CDX81360 | Canola | plastid | 44.32 | 23.28 |
Protein Annotations
| EnsemblPlants:CDY48125 | EnsemblPlantsGene:GSBRNA2T00088922001 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF12 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:CDY48125 | ProteinID:CDY48125.1 | SEG:seg |
| UniParc:UPI0004EF3754 | UniProt:A0A078IB80 | MapMan:15.5.24 | : | : | : |
Description
BnaCnng15670DBnaCnng15670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB80]
Coordinates
chrLK032755:-:49514..51946
Molecular Weight (calculated)
19265.8 Da
IEP (calculated)
8.137
GRAVY (calculated)
-0.438
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSNTYN SPCAACKFLR RKCMPGCIFA PYFPPEEPHK FANVHKIFGA SNVTKLLNEL LPHQREDAVN SLAYEAEARV RDPVYGCVGA ISYLQRQVHR
101: LQKELDAANA DLVHYGLSTS TPSNIVDSVF QPQPLPQQPQ PLNPVYRLPG ASHGTGGSCG TFLPWNNGHN QQGGNM
101: LQKELDAANA DLVHYGLSTS TPSNIVDSVF QPQPLPQQPQ PLNPVYRLPG ASHGTGGSCG TFLPWNNGHN QQGGNM
001: MASSSNSYNS PCAACKFLRR KCMPGCIFAP YFPPEEPHKF ANVHKIFGAS NVTKLLNELL PHQREDAVNS LAYEAEARVR DPVYGCVGAI SYLQRQVHRL
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
Arabidopsis Description
LOBLOB [Source:UniProtKB/TrEMBL;Acc:A0A178UKE6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.