Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- cytosol 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68853 | Canola | plastid | 90.86 | 93.37 |
| CDY69697 | Canola | plastid | 90.32 | 92.82 |
| Bra038606.1-P | Field mustard | plastid | 90.32 | 92.82 |
| CDY16738 | Canola | plastid | 87.1 | 92.05 |
| CDY48125 | Canola | plastid | 86.56 | 91.48 |
| Bra035860.1-P | Field mustard | plastid | 84.95 | 89.77 |
| VIT_17s0000g09010.t01 | Wine grape | plastid | 62.37 | 63.04 |
| PGSC0003DMT400069646 | Potato | plastid | 56.45 | 60.0 |
| KRH54338 | Soybean | plastid | 59.14 | 59.46 |
| KRH03242 | Soybean | nucleus, plastid | 60.22 | 59.26 |
| KRH63606 | Soybean | plastid | 57.53 | 58.79 |
| PGSC0003DMT400046644 | Potato | nucleus, plastid | 59.68 | 58.12 |
| KRH57118 | Soybean | plastid | 60.22 | 56.85 |
| AT3G27650.1 | Thale cress | cytosol, nucleus, plastid | 47.85 | 55.97 |
| Solyc03g112430.1.1 | Tomato | nucleus, plastid | 58.06 | 55.1 |
| Solyc06g071660.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 55.91 | 51.23 |
| AT1G65620.1 | Thale cress | plastid | 48.39 | 45.23 |
| AT1G31320.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 40.86 | 44.19 |
| AT1G16530.1 | Thale cress | mitochondrion | 37.63 | 42.42 |
| Os01t0169400-01 | Rice | plastid | 55.38 | 41.04 |
| TraesCS3B01G108500.1 | Wheat | plastid | 54.84 | 39.69 |
| TraesCS3D01G093500.1 | Wheat | plastid | 54.84 | 39.69 |
| AT2G30130.1 | Thale cress | mitochondrion, nucleus | 40.86 | 39.38 |
| TraesCS3A01G093200.1 | Wheat | plastid | 54.3 | 39.3 |
| Zm00001d039694_P001 | Maize | plastid | 54.3 | 38.7 |
| EES00235 | Sorghum | plastid | 54.3 | 37.69 |
| HORVU3Hr1G016690.1 | Barley | plastid | 54.84 | 36.82 |
| AT1G07900.1 | Thale cress | plastid | 35.48 | 34.74 |
| AT2G40470.1 | Thale cress | cytosol, nucleus, plastid | 38.71 | 32.14 |
| AT2G28500.1 | Thale cress | plastid | 34.95 | 28.02 |
| AT5G66870.1 | Thale cress | nucleus | 44.09 | 26.2 |
| AT2G23660.2 | Thale cress | mitochondrion, nucleus | 42.47 | 25.4 |
| AT2G30340.2 | Thale cress | nucleus | 33.87 | 23.42 |
Protein Annotations
| MapMan:15.5.24 | EntrezGene:836429 | UniProt:A0A178UKE6 | EMBL:AB164305 | EMBL:AB473837 | ProteinID:AED97700.1 |
| ProteinID:AED97701.1 | ProteinID:AED97702.1 | ProteinID:AED97703.1 | EMBL:AF447897 | EMBL:AF447898 | EMBL:AF447899 |
| EMBL:AF447900 | ArrayExpress:AT5G63090 | EnsemblPlantsGene:AT5G63090 | RefSeq:AT5G63090 | TAIR:AT5G63090 | RefSeq:AT5G63090-TAIR-G |
| EnsemblPlants:AT5G63090.3 | TAIR:AT5G63090.3 | Unigene:At.28568 | ProteinID:BAB10551.1 | EMBL:BT025745 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009653 |
| GO:GO:0010199 | InterPro:IPR004883 | InterPro:LOB | Symbol:LOB | RefSeq:NP_201114.1 | RefSeq:NP_851252.1 |
| RefSeq:NP_851253.1 | RefSeq:NP_851254.1 | ProteinID:OAO94298.1 | PFAM:PF03195 | PO:PO:0009009 | PO:PO:0009066 |
| PFscan:PS50891 | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF35 | UniProt:Q9FML4 | UniParc:UPI000012E7A8 | SEG:seg |
Description
LOBLOB [Source:UniProtKB/TrEMBL;Acc:A0A178UKE6]
Coordinates
chr5:-:25308572..25310973
Molecular Weight (calculated)
20228.0 Da
IEP (calculated)
8.214
GRAVY (calculated)
-0.368
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSNSYNS PCAACKFLRR KCMPGCIFAP YFPPEEPHKF ANVHKIFGAS NVTKLLNELL PHQREDAVNS LAYEAEARVR DPVYGCVGAI SYLQRQVHRL
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.