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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 4
  • mitochondrion 3
  • cytosol 1
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46781 Canola nucleus, plastid 97.99 96.53
CDY16414 Canola nucleus, plastid 97.99 96.53
Bra039733.1-P Field mustard nucleus, plastid 97.99 96.53
Solyc03g063140.2.1 Tomato nucleus, plastid 64.82 74.14
VIT_00s0340g00090.t01 Wine grape nucleus 78.39 72.22
PGSC0003DMT400002549 Potato plastid 65.83 69.31
Solyc11g008830.1.1 Tomato plastid 76.38 66.09
AT3G27650.1 Thale cress cytosol, nucleus, plastid 39.2 49.06
AT5G63090.3 Thale cress plastid 45.23 48.39
KRG88909 Soybean nucleus 47.24 43.93
AT1G31320.1 Thale cress cytosol, mitochondrion, nucleus, plastid 36.68 42.44
AT1G16530.1 Thale cress mitochondrion 34.67 41.82
TraesCS1A01G260000.1 Wheat plastid 54.77 41.29
TraesCS1B01G270400.1 Wheat plastid 54.27 41.06
TraesCS1D01G259900.1 Wheat plastid 54.27 41.06
Zm00001d042560_P002 Maize plastid 53.27 40.77
TraesCS3B01G435700.1 Wheat plastid 52.76 40.54
TraesCS3D01G397200.1 Wheat plastid 52.26 40.15
TraesCS3A01G402300.1 Wheat plastid 52.26 40.15
Os05t0417000-00 Rice plastid 54.77 39.07
HORVU1Hr1G064640.3 Barley plastid 54.27 38.85
Os01t0889400-02 Rice plastid 51.76 38.29
HORVU3Hr1G090250.5 Barley plastid 50.75 37.41
HORVU3Hr1G090240.2 Barley plastid 50.75 37.41
AT2G30130.1 Thale cress mitochondrion, nucleus 36.18 37.31
AT1G07900.1 Thale cress plastid 34.67 36.32
AT2G40470.1 Thale cress cytosol, nucleus, plastid 36.68 32.59
OQU88012 Sorghum mitochondrion, vacuole 54.27 32.53
Zm00001d010264_P001 Maize plastid 44.72 32.25
OQU78015 Sorghum plastid 49.75 32.14
AT5G66870.1 Thale cress nucleus 46.23 29.39
Zm00001d038197_P001 Maize plastid 40.2 28.78
AT2G28500.1 Thale cress plastid 32.66 28.02
AT2G23660.2 Thale cress mitochondrion, nucleus 42.21 27.01
Zm00001d047521_P001 Maize plastid 30.15 25.42
AT2G30340.2 Thale cress nucleus 34.17 25.28
Protein Annotations
MapMan:15.5.24EntrezGene:842873UniProt:A0A178WIA0ProteinID:AAB60912.1ProteinID:AAS00609.1EMBL:AB080802
EMBL:AB473833ProteinID:AEE34401.1ProteinID:AEE34402.1ProteinID:AEE34403.1ProteinID:AEE34404.1EMBL:AF447887
ProteinID:ANM57892.1Symbol:AS2ArrayExpress:AT1G65620EnsemblPlantsGene:AT1G65620RefSeq:AT1G65620TAIR:AT1G65620
RefSeq:AT1G65620-TAIR-GEnsemblPlants:AT1G65620.1TAIR:AT1G65620.1EMBL:BT025163ncoils:CoilGO:GO:0000003
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005654GO:GO:0007275GO:GO:0008150GO:GO:0009791GO:GO:0009799
GO:GO:0009908GO:GO:0009943GO:GO:0009944GO:GO:0009954GO:GO:0048441InterPro:IPR004883
InterPro:LOBRefSeq:NP_001077777.1RefSeq:NP_001077778.1RefSeq:NP_001117553.1RefSeq:NP_001320370.1RefSeq:NP_176739.1
UniProt:O04479ProteinID:OAP18109.1PFAM:PF03195PO:PO:0000017PO:PO:0000025PO:PO:0000037
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0004507PO:PO:0006018
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009052PO:PO:0020137PO:PO:0025022PFscan:PS50891PANTHER:PTHR31301PANTHER:PTHR31301:SF5
UniParc:UPI00000A1D20SEG:seg::::
Description
AS2AS2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIA0]
Coordinates
chr1:+:24398156..24400989
Molecular Weight (calculated)
21710.7 Da
IEP (calculated)
7.533
GRAVY (calculated)
-0.317
Length
199 amino acids
Sequence
(BLAST)
001: MASSSTNSPC AACKFLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLNELHPS QREDAVNSLA YEADMRLRDP VYGCVGVISL LQHQLRQLQI
101: DLSCAKSELS KYQSLGILAA THQSLGINLL AGAADGTATA VRDHYHHHQF FPREQMFGGL DVPAGNNYDG GILAIGQITQ FQQPRAAAGD DGRRTVDPS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.