Factsheet for Bra039733.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000011.1-P	nucleus
Bra005177.1-P	nucleus
Bra008514.1-P	nucleus
Bra037322.1-P
Bra037323.1-P	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65620.1	Bra000011.1-P	AT2G37630.1	22822207
AT1G65620.1	Bra005177.1-P	AT2G37630.1	22822207
AT1G65620.1	Bra000011.1-P	AT2G37630.1	22822207
AT1G65620.1	Bra005177.1-P	AT2G37630.1	22822207
AT1G65620.1	Bra037322.1-P	AT4G00210.1	22822207
AT1G65620.1	Bra008514.1-P	AT4G00220.1	22822207
AT1G65620.1	Bra037323.1-P	AT4G00220.1	22822207
AT1G65620.1	Bra008514.1-P	AT4G00220.1	22822207
AT1G65620.1	Bra037323.1-P	AT4G00220.1	22822207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46781	Canola	nucleus, plastid	100.0	100.0
CDY16414	Canola	nucleus, plastid	100.0	100.0
AT1G65620.1	Thale cress	plastid	96.53	97.99
Solyc03g063140.2.1	Tomato	nucleus, plastid	64.36	74.71
VIT_00s0340g00090.t01	Wine grape	nucleus	77.72	72.69
PGSC0003DMT400002549	Potato	plastid	65.35	69.84
Solyc11g008830.1.1	Tomato	plastid	76.24	66.96
Bra033019.1-P	Field mustard	plastid	40.59	62.12
Bra039072.1-P	Field mustard	plastid	40.1	61.83
Bra025294.1-P	Field mustard	plastid	40.1	61.36
Bra038606.1-P	Field mustard	plastid	46.04	51.38
Bra035860.1-P	Field mustard	plastid	43.56	50.0
KRG88909	Soybean	nucleus	46.53	43.93
Bra026042.1-P	Field mustard	mitochondrion	35.15	43.56
Bra014907.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	36.63	43.02
Bra026716.1-P	Field mustard	mitochondrion	33.66	41.46
TraesCS1A01G260000.1	Wheat	plastid	53.96	41.29
TraesCS1B01G270400.1	Wheat	plastid	53.47	41.06
TraesCS1D01G259900.1	Wheat	plastid	53.47	41.06
Zm00001d042560_P002	Maize	plastid	52.48	40.77
TraesCS3B01G435700.1	Wheat	plastid	51.98	40.54
TraesCS3A01G402300.1	Wheat	plastid	51.49	40.15
TraesCS3D01G397200.1	Wheat	plastid	51.49	40.15
Bra022780.1-P	Field mustard	mitochondrion, nucleus	36.63	39.36
Os05t0417000-00	Rice	plastid	53.96	39.07
HORVU1Hr1G064640.3	Barley	plastid	53.47	38.85
Bra018335.1-P	Field mustard	mitochondrion	36.14	38.62
Bra021612.1-P	Field mustard	nucleus	36.14	38.42
Os01t0889400-02	Rice	plastid	50.99	38.29
HORVU3Hr1G090240.2	Barley	plastid	49.51	37.04
HORVU3Hr1G090250.5	Barley	plastid	49.51	37.04
Bra000188.1-P	Field mustard	plastid	34.65	35.18
Bra016992.1-P	Field mustard	plastid	34.65	34.83
Bra031599.1-P	Field mustard	nucleus, plastid	33.66	32.85
OQU88012	Sorghum	mitochondrion, vacuole	53.47	32.53
Bra018675.1-P	Field mustard	plastid	33.17	32.52
OQU78015	Sorghum	plastid	49.51	32.47
Bra004572.1-P	Field mustard	cytosol, mitochondrion, nucleus	35.64	32.29
Zm00001d010264_P001	Maize	plastid	44.06	32.25
Bra011942.1-P	Field mustard	plastid	34.16	29.61
Bra035698.1-P	Field mustard	plastid	33.17	29.26
Bra018320.1-P	Field mustard	mitochondrion	33.66	28.81
Zm00001d038197_P001	Maize	plastid	39.6	28.78
Bra032153.1-P	Field mustard	mitochondrion, nucleus	43.56	28.57
Bra000491.1-P	Field mustard	plastid	32.67	28.57
Bra012112.1-P	Field mustard	nucleus, plastid	45.54	27.22
Zm00001d047521_P001	Maize	plastid	29.7	25.42
Bra037142.1-P	Field mustard	nucleus, plastid	41.09	21.07

Protein Annotations

MapMan:15.5.24	EnsemblPlantsGene:Bra039733	EnsemblPlants:Bra039733.1	EnsemblPlants:Bra039733.1-P	ncoils:Coil	GO:GO:0000003
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0007275
GO:GO:0008150	GO:GO:0009791	GO:GO:0009799	GO:GO:0009908	GO:GO:0009943	GO:GO:0009944
GO:GO:0009954	GO:GO:0048441	InterPro:IPR004883	InterPro:LOB	UniProt:M4FF61	PFAM:PF03195
PFscan:PS50891	PANTHER:PTHR31301	PANTHER:PTHR31301:SF5	UniParc:UPI000254593B	:	:

Description

AT1G65620 (E=9e-109) AS2 | AS2 (ASYMMETRIC LEAVES 2); protein binding

Coordinates

chrA02:+:9622401..9623009

Molecular Weight (calculated)

22095.1 Da

IEP (calculated)

7.561

GRAVY (calculated)

-0.375

Length

202 amino acids

Sequence
(BLAST)

001: MASSSTNSPC AACKFLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLNELHPS QREDAVNSLA YEADMRLRDP VYGCVGVISL LQHQLRQLQI
101: DLSCAKSELS KYQSLGILAA THQSLGINLL AGANADGSTT ATVRDHHYHH HQFFPREQMF GGLDVPTGNN YDGGILAIGQ ISQFQQPRAA AGDDGRRTVD
201: PS

Best Arabidopsis Sequence Match ( AT1G65620.2 )
(BLAST)

001: MASSSTNSPC AACKFLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLNELHPS QREDAVNSLA YEADMRLRDP VYGCVGVISL LQHQLRQLQI
101: DLSCAKSELS KYQSLGILAA THQSLGINLL AGAADGTATA VRDHYHHHQF FPREQMFGGL DVPAGNNYDG GILAIGQITQ FQQPRAAAGD DGRRTVDPS

Arabidopsis Description

AS2AS2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIA0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.