Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 5
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc01g091400.2.1 | |
| Solyc01g091420.1.1 | nucleus |
| Solyc09g010840.1.1 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g063140.2.1 | Tomato | nucleus, plastid | 64.35 | 85.06 |
| VIT_00s0340g00090.t01 | Wine grape | nucleus | 75.22 | 80.09 |
| AT1G65620.1 | Thale cress | plastid | 66.09 | 76.38 |
| Bra039733.1-P | Field mustard | nucleus, plastid | 66.96 | 76.24 |
| CDY16414 | Canola | nucleus, plastid | 66.96 | 76.24 |
| CDY46781 | Canola | nucleus, plastid | 66.96 | 76.24 |
| KRH13283 | Soybean | nucleus | 57.39 | 62.26 |
| KRH20638 | Soybean | nucleus | 56.96 | 61.22 |
| Solyc02g086480.1.1 | Tomato | plastid | 36.96 | 57.05 |
| Solyc02g067800.2.1 | Tomato | plastid | 38.26 | 52.38 |
| Solyc03g112430.1.1 | Tomato | nucleus, plastid | 40.0 | 46.94 |
| Solyc06g071660.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 38.7 | 43.84 |
| Solyc02g069440.2.1 | Tomato | nucleus | 30.43 | 43.48 |
| Solyc11g045530.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 31.74 | 42.69 |
| Solyc06g082310.2.1 | Tomato | mitochondrion, nucleus, plastid | 31.3 | 41.38 |
| Solyc06g050950.2.1 | Tomato | mitochondrion, nucleus, plastid | 30.43 | 40.94 |
| Solyc12g100150.1.1 | Tomato | mitochondrion | 29.57 | 40.48 |
| TraesCS3D01G397200.1 | Wheat | plastid | 45.22 | 40.15 |
| TraesCS3B01G435700.1 | Wheat | plastid | 45.22 | 40.15 |
| TraesCS3A01G402300.1 | Wheat | plastid | 45.22 | 40.15 |
| TraesCS1A01G260000.1 | Wheat | plastid | 46.09 | 40.15 |
| Solyc04g050010.1.1 | Tomato | cytosol | 28.7 | 40.0 |
| TraesCS1B01G270400.1 | Wheat | plastid | 45.65 | 39.92 |
| TraesCS1D01G259900.1 | Wheat | plastid | 45.65 | 39.92 |
| Zm00001d042560_P002 | Maize | plastid | 44.78 | 39.62 |
| Os01t0889400-02 | Rice | plastid | 46.09 | 39.41 |
| HORVU1Hr1G064640.3 | Barley | plastid | 45.65 | 37.77 |
| Os05t0417000-00 | Rice | plastid | 45.65 | 37.63 |
| HORVU3Hr1G090240.2 | Barley | plastid | 42.61 | 36.3 |
| HORVU3Hr1G090250.5 | Barley | plastid | 42.61 | 36.3 |
| Solyc01g044520.1.1 | Tomato | nucleus | 26.96 | 36.26 |
| Solyc02g065150.1.1 | Tomato | nucleus | 45.22 | 35.74 |
| Solyc11g072470.1.1 | Tomato | plastid | 29.13 | 35.45 |
| Solyc06g005090.2.1 | Tomato | plastid | 30.0 | 34.85 |
| OQU78015 | Sorghum | plastid | 44.78 | 33.44 |
| Zm00001d010264_P001 | Maize | plastid | 40.0 | 33.33 |
| Solyc02g090410.2.1 | Tomato | mitochondrion, plastid | 44.78 | 32.7 |
| Solyc06g050430.2.1 | Tomato | nucleus | 30.43 | 32.26 |
| OQU88012 | Sorghum | mitochondrion, vacuole | 45.65 | 31.63 |
| Solyc05g048740.2.1 | Tomato | nucleus, plastid | 29.13 | 31.16 |
| Zm00001d038197_P001 | Maize | plastid | 37.39 | 30.94 |
| Solyc06g007390.2.1 | Tomato | nucleus | 30.87 | 29.83 |
| Solyc06g082430.1.1 | Tomato | cytosol, nucleus, plastid | 30.0 | 29.74 |
| Zm00001d047521_P001 | Maize | plastid | 28.7 | 27.97 |
| Solyc06g075330.1.1 | Tomato | golgi, nucleus, plastid | 23.48 | 22.31 |
Protein Annotations
| EnsemblPlants:Solyc11g008830.1.1 | EnsemblPlantsGene:Solyc11g008830.1 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF5 | PFAM:PF03195 | PFscan:PS50891 | SEG:seg | UniParc:UPI0002769368 | UniProt:K4D5E3 |
| MapMan:15.5.24 | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:3019777..3021109
Molecular Weight (calculated)
25151.4 Da
IEP (calculated)
8.197
GRAVY (calculated)
-0.540
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSSLSSN SPCAACKFLR RKCQPECVFA PYFPPDQPQK FANVHKVFGA SNVTKLLNEL QPHQREDAVN SLAYEADMRL RDPVYGCVGV ISLLQHQLRQ
101: LQMDLSCAKS ELSKYQNLGG IASTTTHGLL AAAAAAAATT AHHHHHQQFN FMAGSGGGGG GGRDHSHHLY HHQFFPRDQQ QQQHQHMIRA FEGHGSNNFD
201: ASSLFIGQLS QFQQPRAAGA DGHRTPVDPS
101: LQMDLSCAKS ELSKYQNLGG IASTTTHGLL AAAAAAAATT AHHHHHQQFN FMAGSGGGGG GGRDHSHHLY HHQFFPRDQQ QQQHQHMIRA FEGHGSNNFD
201: ASSLFIGQLS QFQQPRAAGA DGHRTPVDPS
001: MASSSTNSPC AACKFLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLNELHPS QREDAVNSLA YEADMRLRDP VYGCVGVISL LQHQLRQLQI
101: DLSCAKSELS KYQSLGILAA THQSLGINLL AGAADGTATA VRDHYHHHQF FPREQMFGGL DVPAGNNYDG GILAIGQITQ FQQPRAAAGD DGRRTVDPS
101: DLSCAKSELS KYQSLGILAA THQSLGINLL AGAADGTATA VRDHYHHHQF FPREQMFGGL DVPAGNNYDG GILAIGQITQ FQQPRAAAGD DGRRTVDPS
Arabidopsis Description
AS2AS2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIA0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.