Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400022286 | Potato | cytosol, mitochondrion, nucleus, plastid | 98.25 | 98.25 |
| VIT_19s0027g01120.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 78.95 | 79.41 |
| KRH43747 | Soybean | mitochondrion | 78.36 | 75.71 |
| KRH13706 | Soybean | mitochondrion | 76.61 | 73.6 |
| Solyc02g069440.2.1 | Tomato | nucleus | 65.5 | 69.57 |
| Solyc12g100150.1.1 | Tomato | mitochondrion | 62.57 | 63.69 |
| Bra026042.1-P | Field mustard | mitochondrion | 56.14 | 58.9 |
| CDY66794 | Canola | mitochondrion | 56.14 | 58.9 |
| CDX81767 | Canola | cytosol, nucleus, plastid | 56.14 | 58.54 |
| CDY40054 | Canola | mitochondrion | 55.56 | 58.28 |
| AT1G16530.1 | Thale cress | mitochondrion | 54.39 | 56.36 |
| Bra026716.1-P | Field mustard | mitochondrion | 53.8 | 56.1 |
| GSMUA_Achr5P02190_001 | Banana | mitochondrion | 54.39 | 56.02 |
| Solyc06g082310.2.1 | Tomato | mitochondrion, nucleus, plastid | 56.73 | 55.75 |
| GSMUA_Achr4P32000_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 59.06 | 55.49 |
| CDY50999 | Canola | cytosol, mitochondrion, plastid | 53.22 | 55.49 |
| TraesCS4B01G016200.1 | Wheat | plastid | 56.73 | 55.43 |
| GSMUA_Achr7P00880_001 | Banana | cytosol, nucleus, plastid | 60.23 | 55.38 |
| TraesCS4A01G297500.1 | Wheat | plastid | 55.56 | 54.91 |
| GSMUA_Achr2P13170_001 | Banana | nucleus | 55.56 | 54.6 |
| HORVU4Hr1G002480.2 | Barley | cytosol | 56.14 | 53.93 |
| Solyc06g050950.2.1 | Tomato | mitochondrion, nucleus, plastid | 52.05 | 52.05 |
| Zm00001d013625_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 59.06 | 50.75 |
| EER93717 | Sorghum | plastid | 59.65 | 49.28 |
| Zm00001d033466_P001 | Maize | plastid | 58.48 | 47.39 |
| Solyc04g050010.1.1 | Tomato | cytosol | 44.44 | 46.06 |
| Solyc11g072470.1.1 | Tomato | plastid | 47.95 | 43.39 |
| Solyc02g086480.1.1 | Tomato | plastid | 37.43 | 42.95 |
| Solyc06g005090.2.1 | Tomato | plastid | 48.54 | 41.92 |
| Solyc02g067800.2.1 | Tomato | plastid | 40.94 | 41.67 |
| Solyc03g063140.2.1 | Tomato | nucleus, plastid | 41.52 | 40.8 |
| Solyc01g044520.1.1 | Tomato | nucleus | 40.35 | 40.35 |
| Solyc03g112430.1.1 | Tomato | nucleus, plastid | 42.69 | 37.24 |
| Solyc05g048740.2.1 | Tomato | nucleus, plastid | 46.78 | 37.21 |
| Solyc06g050430.2.1 | Tomato | nucleus | 46.2 | 36.41 |
| Solyc06g082430.1.1 | Tomato | cytosol, nucleus, plastid | 46.2 | 34.05 |
| Solyc06g071660.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 39.18 | 33.0 |
| TraesCS4D01G014600.1 | Wheat | nucleus | 56.14 | 32.65 |
| Solyc11g008830.1.1 | Tomato | plastid | 42.69 | 31.74 |
| Solyc06g007390.2.1 | Tomato | nucleus | 42.69 | 30.67 |
| Solyc06g075330.1.1 | Tomato | golgi, nucleus, plastid | 41.52 | 29.34 |
| Solyc02g065150.1.1 | Tomato | nucleus | 40.94 | 24.05 |
| Solyc02g090410.2.1 | Tomato | mitochondrion, plastid | 42.69 | 23.17 |
Protein Annotations
| EnsemblPlants:Solyc11g045530.1.1 | EnsemblPlantsGene:Solyc11g045530.1 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF58 | PFAM:PF03195 | PFscan:PS50891 | UniParc:UPI000276A788 | UniProt:K4D8L7 | MapMan:15.5.24 |
Description
No Description!
Coordinates
chr11:-:30301333..30304063
Molecular Weight (calculated)
18630.1 Da
IEP (calculated)
7.846
GRAVY (calculated)
-0.336
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MKESGRKQGA ASPCAACKLL RRRCAQDCVF APYFPADEPH KFASVHKVFG ASNVNKMLQE LPEHQRGDAV SSMVYEANAR VRDPVYGCVG AISSLQQQID
101: HLQSQLAIAQ AEVVHMRMRQ FSSISGGGTA GNSPENVSPS SRHTQTQPTM SLFTMDMVVD QANIGESLWS C
101: HLQSQLAIAQ AEVVHMRMRQ FSSISGGGTA GNSPENVSPS SRHTQTQPTM SLFTMDMVVD QANIGESLWS C
001: MKESSRKQGA ASPCAACKLL RRRCAQDCVF SPYFPADEPQ KFANVHRVFG ASNVNKMLQE LPIHQRGDAV SSMVYEANAR VRDPVYGCVG AISSLQQQID
101: VLQAQLALAQ AEVVHLRVRQ STNFPGHGLC PDSPSSSGSP SSKQVSPQDN KGMFSHMDIV DEASLGESMW SC
101: VLQAQLALAQ AEVVHLRVRQ STNFPGHGLC PDSPSSSGSP SSKQVSPQDN KGMFSHMDIV DEASLGESMW SC
Arabidopsis Description
LBD4LOB domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHE9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.