Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g045530.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 79.41 | 78.95 |
| PGSC0003DMT400022286 | Potato | cytosol, mitochondrion, nucleus, plastid | 79.41 | 78.95 |
| KRH43747 | Soybean | mitochondrion | 80.59 | 77.4 |
| KRH13706 | Soybean | mitochondrion | 79.41 | 75.84 |
| VIT_00s0125g00290.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 74.71 | 72.57 |
| PGSC0003DMT400061283 | Potato | mitochondrion, nucleus | 61.18 | 61.54 |
| Solyc12g100150.1.1 | Tomato | mitochondrion | 60.59 | 61.31 |
| VIT_06s0004g07200.t01 | Wine grape | mitochondrion, nucleus | 57.06 | 59.51 |
| Bra026042.1-P | Field mustard | mitochondrion | 55.88 | 58.28 |
| CDY66794 | Canola | mitochondrion | 55.88 | 58.28 |
| CDY40054 | Canola | mitochondrion | 55.29 | 57.67 |
| CDX81767 | Canola | cytosol, nucleus, plastid | 55.29 | 57.32 |
| VIT_13s0067g01880.t01 | Wine grape | mitochondrion | 56.47 | 56.14 |
| CDY50999 | Canola | cytosol, mitochondrion, plastid | 54.12 | 56.1 |
| Bra026716.1-P | Field mustard | mitochondrion | 54.12 | 56.1 |
| AT1G16530.1 | Thale cress | mitochondrion | 53.53 | 55.15 |
| GSMUA_Achr7P00880_001 | Banana | cytosol, nucleus, plastid | 60.0 | 54.84 |
| TraesCS4A01G297500.1 | Wheat | plastid | 55.29 | 54.34 |
| TraesCS4B01G016200.1 | Wheat | plastid | 55.88 | 54.29 |
| GSMUA_Achr4P32000_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 57.65 | 53.85 |
| HORVU4Hr1G002480.2 | Barley | cytosol | 55.88 | 53.37 |
| VIT_13s0019g03760.t01 | Wine grape | plastid | 42.94 | 53.28 |
| GSMUA_Achr5P02190_001 | Banana | mitochondrion | 51.76 | 53.01 |
| GSMUA_Achr2P13170_001 | Banana | nucleus | 54.12 | 52.87 |
| Zm00001d013625_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 57.65 | 49.25 |
| EER93717 | Sorghum | plastid | 58.82 | 48.31 |
| Zm00001d033466_P001 | Maize | plastid | 57.65 | 46.45 |
| VIT_13s0019g03710.t01 | Wine grape | nucleus, plastid | 44.12 | 45.45 |
| VIT_13s0019g03720.t01 | Wine grape | nucleus, plastid | 42.94 | 45.06 |
| VIT_06s0004g03330.t01 | Wine grape | nucleus, plastid | 51.18 | 43.07 |
| VIT_13s0019g03700.t01 | Wine grape | plastid | 49.41 | 42.64 |
| VIT_13s0019g03750.t01 | Wine grape | plastid | 42.94 | 41.95 |
| VIT_13s0019g03780.t01 | Wine grape | plastid | 41.76 | 41.04 |
| VIT_06s0004g03350.t01 | Wine grape | plastid | 48.82 | 40.69 |
| VIT_14s0066g00680.t01 | Wine grape | nucleus, plastid | 39.41 | 39.41 |
| VIT_17s0000g09010.t01 | Wine grape | plastid | 41.76 | 38.59 |
| VIT_13s0067g02380.t01 | Wine grape | nucleus | 47.65 | 36.16 |
| VIT_06s0004g07790.t01 | Wine grape | cytosol | 47.06 | 34.93 |
| VIT_00s0340g00090.t01 | Wine grape | nucleus | 41.18 | 32.41 |
| TraesCS4D01G014600.1 | Wheat | nucleus | 55.29 | 31.97 |
| VIT_00s1247g00010.t01 | Wine grape | nucleus | 42.94 | 30.29 |
| VIT_07s0197g00030.t01 | Wine grape | nucleus | 40.0 | 27.76 |
| VIT_07s0197g00020.t01 | Wine grape | nucleus | 42.94 | 25.0 |
| VIT_16s0022g02050.t01 | Wine grape | cytosol, mitochondrion, nucleus | 40.59 | 24.04 |
| VIT_07s0197g00040.t01 | Wine grape | cytosol, nucleus, plastid | 39.41 | 22.41 |
Protein Annotations
| EntrezGene:100252484 | wikigene:100252484 | MapMan:15.5.24 | UniProt:A5BKW9 | EMBL:AM463015 | ProteinID:CAN83356 |
| ProteinID:CAN83356.1 | ProteinID:CBI21734 | ProteinID:CBI21734.3 | ncoils:Coil | EMBL:FN595234 | InterPro:IPR004883 |
| InterPro:LOB | EntrezGene:LOC100252484 | wikigene:LOC100252484 | PFAM:PF03195 | PFscan:PS50891 | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF58 | TIGR:TC52199 | UniParc:UPI0001524701 | ArrayExpress:VIT_19s0027g01120 | EnsemblPlantsGene:VIT_19s0027g01120 | EnsemblPlants:VIT_19s0027g01120.t01 |
| unigene:Vvi.15143 | RefSeq:XP_002264049 | RefSeq:XP_002264049.2 | : | : | : |
Description
No Description!
Coordinates
chr19:+:20862802..20865840
Molecular Weight (calculated)
18764.2 Da
IEP (calculated)
7.461
GRAVY (calculated)
-0.335
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MKESGRKQGA VSPCAACKLL RRRCAQDCVF APYFPADEPH KFASVHKVFG ASNVNKMLQE LPEHQRSDAV SSMVYEANAR VRDPVYGCVG AISSLQQQID
101: ALQTQLALVQ AEVVQMRMNQ FTSSTSNQAT DSPENASHTS RLAASPQTKS FFSMDMVVDH ANMVESLWSY
101: ALQTQLALVQ AEVVQMRMNQ FTSSTSNQAT DSPENASHTS RLAASPQTKS FFSMDMVVDH ANMVESLWSY
001: MKESSRKQGA ASPCAACKLL RRRCAQDCVF SPYFPADEPQ KFANVHRVFG ASNVNKMLQE LPIHQRGDAV SSMVYEANAR VRDPVYGCVG AISSLQQQID
101: VLQAQLALAQ AEVVHLRVRQ STNFPGHGLC PDSPSSSGSP SSKQVSPQDN KGMFSHMDIV DEASLGESMW SC
101: VLQAQLALAQ AEVVHLRVRQ STNFPGHGLC PDSPSSSGSP SSKQVSPQDN KGMFSHMDIV DEASLGESMW SC
Arabidopsis Description
LBD4LOB domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHE9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.