CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43747	Soybean	mitochondrion	94.38	94.92
VIT_19s0027g01120.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	75.84	79.41
Solyc11g045530.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	73.6	76.61
PGSC0003DMT400022286	Potato	cytosol, mitochondrion, nucleus, plastid	73.03	76.02
KRH50484	Soybean	cytosol, nucleus, plastid	66.85	74.84
KRG89441	Soybean	cytosol, nucleus, plastid	67.42	73.17
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	67.98	71.18
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	67.98	71.18
PGSC0003DMT400061283	Potato	mitochondrion, nucleus	57.3	60.35
KRH73255	Soybean	mitochondrion, nucleus, plastid	51.69	59.74
Solyc12g100150.1.1	Tomato	mitochondrion	56.18	59.52
KRH14912	Soybean	nucleus	51.12	59.48
Bra026042.1-P	Field mustard	mitochondrion	52.25	57.06
CDY66794	Canola	mitochondrion	52.25	57.06
CDY40054	Canola	mitochondrion	51.69	56.44
KRG97685	Soybean	mitochondrion, nucleus	51.12	55.15
AT1G16530.1	Thale cress	mitochondrion	51.12	55.15
GSMUA_Achr4P32000_001	Banana	cytosol, mitochondrion, nucleus, plastid	56.18	54.95
CDX81767	Canola	cytosol, nucleus, plastid	50.56	54.88
TraesCS4A01G297500.1	Wheat	plastid	52.81	54.34
TraesCS4B01G016200.1	Wheat	plastid	53.37	54.29
Bra026716.1-P	Field mustard	mitochondrion	49.44	53.66
GSMUA_Achr7P00880_001	Banana	cytosol, nucleus, plastid	55.62	53.23
CDY50999	Canola	cytosol, mitochondrion, plastid	48.88	53.05
GSMUA_Achr5P02190_001	Banana	mitochondrion	48.88	52.41
KRH30173	Soybean	mitochondrion, nucleus	50.56	52.33
HORVU4Hr1G002480.2	Barley	cytosol	52.25	52.25
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	31.46	51.85
KRG98217	Soybean	mitochondrion	50.0	51.74
GSMUA_Achr2P13170_001	Banana	nucleus	49.44	50.57
Zm00001d013625_P001	Maize	cytosol, mitochondrion, nucleus, plastid	53.37	47.74
KRH10407	Soybean	mitochondrion	46.07	47.67
EER93717	Sorghum	plastid	54.49	46.86
Zm00001d033466_P001	Maize	plastid	53.93	45.5
KRH56556	Soybean	nucleus, plastid	41.57	43.53
KRG93235	Soybean	plastid	40.45	42.86
KRH63606	Soybean	plastid	43.26	42.31
KRH54338	Soybean	plastid	43.26	41.62
KRH22937	Soybean	plastid	46.07	41.41
KRH07170	Soybean	plastid	41.57	41.11
KRH03242	Soybean	nucleus, plastid	43.26	40.74
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	41.01	40.11
KRH24932	Soybean	nucleus, plastid	45.51	40.1
KRG89044	Soybean	nucleus, plastid	44.94	39.22
KRH57118	Soybean	plastid	43.26	39.09
KRG91848	Soybean	plastid	46.07	36.94
KRH34918	Soybean	plastid	46.07	36.94
KRH64170	Soybean	nucleus	45.51	36.49
KRH53776	Soybean	nucleus	44.94	36.04
KRH13283	Soybean	nucleus	39.89	33.49
KRH20638	Soybean	nucleus	39.89	33.18
KRH17149	Soybean	cytosol, mitochondrion, nucleus	45.51	32.53
KRH62409	Soybean	nucleus	38.2	32.08
KRH72805	Soybean	cytosol, mitochondrion, nucleus	45.51	32.02
KRG88909	Soybean	nucleus	38.2	31.78
TraesCS4D01G014600.1	Wheat	nucleus	52.25	31.63
KRH53127	Soybean	nucleus	34.27	29.9
KRH57745	Soybean	nucleus	41.01	26.45
KRH76950	Soybean	nucleus	39.89	23.36
KRH28509	Soybean	nucleus	39.89	23.05

Protein Annotations

EMBL:ACUP02009772	EMBL:BT097864	EnsemblPlants:KRH13706	EnsemblPlantsGene:GLYMA_15G258100	EntrezGene:100790989	InterPro:IPR004883
InterPro:LOB	ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF58	PFAM:PF03195	PFscan:PS50891
ProteinID:KRH13706	ProteinID:KRH13706.1	SEG:seg	UniParc:UPI0001B16737	UniProt:C6TJL6	MapMan:15.5.24

Description

hypothetical protein

Coordinates

chr15:+:48836752..48841735

Molecular Weight (calculated)

19837.7 Da

IEP (calculated)

8.212

GRAVY (calculated)

-0.431

Length

178 amino acids

Sequence
(BLAST)

001: MKESGRKQGT MSPCAACKLL RRRCTPDCAF APYFPADEPQ KFDSVHKVFG ASNVNKMLKE LPEHQRSDAV SSMVYEAKAR VRDPVYGCVG AISSLQQQVD
101: VLQTQLALAQ AEVVHMRMRQ FSPLSDQQQQ PSVLPEASNA SSENLYHSSR LLSSQTKSLF SMDMVVDQAN MGQSLWSY

Best Arabidopsis Sequence Match ( AT1G07900.1 )
(BLAST)

001: MESKSDASVA TTPIISSSSS PPPSLSPRVV LSPCAACKIL RRRCAERCVL APYFPPTDPA KFTIAHRVFG ASNIIKFLQE LPESQRTDAV NSMVYEAEAR
101: IRDPVYGCAG AIYHLQRQVS ELQAQLAKAQ VEMVNMQFQR SNLLELIYNM DQQQKQEQDN MSFESNDLGF LEDKSNTNSS MLWWDPLWTC

Arabidopsis Description

LBD1LBD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WM56]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.