Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14912 | Soybean | nucleus | 96.1 | 96.73 |
| CDY51008 | Canola | mitochondrion | 68.83 | 76.26 |
| CDY72536 | Canola | mitochondrion | 66.88 | 74.64 |
| KRG97685 | Soybean | mitochondrion, nucleus | 79.87 | 74.55 |
| GSMUA_Achr6P15660_001 | Banana | mitochondrion, nucleus, plastid | 75.97 | 72.22 |
| GSMUA_Achr9P18030_001 | Banana | mitochondrion, nucleus, plastid | 74.68 | 70.99 |
| KRH30173 | Soybean | mitochondrion, nucleus | 77.27 | 69.19 |
| GSMUA_Achr3P10050_001 | Banana | cytosol, nucleus, plastid | 69.48 | 68.59 |
| KRG98217 | Soybean | mitochondrion | 75.97 | 68.02 |
| GSMUA_Achr10P... | Banana | mitochondrion | 69.48 | 67.72 |
| GSMUA_Achr10P... | Banana | mitochondrion | 68.83 | 67.09 |
| Bra018335.1-P | Field mustard | mitochondrion | 74.68 | 60.85 |
| CDY10714 | Canola | mitochondrion | 74.68 | 60.85 |
| AT2G30130.1 | Thale cress | mitochondrion, nucleus | 74.68 | 59.59 |
| Bra021612.1-P | Field mustard | nucleus | 73.38 | 59.47 |
| Bra022780.1-P | Field mustard | mitochondrion, nucleus | 71.43 | 58.51 |
| CDY24027 | Canola | mitochondrion | 71.43 | 58.51 |
| KRH50484 | Soybean | cytosol, nucleus, plastid | 57.79 | 55.97 |
| KRG89441 | Soybean | cytosol, nucleus, plastid | 58.44 | 54.88 |
| KRH76093 | Soybean | cytosol, endoplasmic reticulum, nucleus | 37.66 | 53.7 |
| KRH43747 | Soybean | mitochondrion | 60.39 | 52.54 |
| KRH36753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 57.79 | 52.35 |
| KRH11753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 57.79 | 52.35 |
| KRH13706 | Soybean | mitochondrion | 59.74 | 51.69 |
| KRG93235 | Soybean | plastid | 48.05 | 44.05 |
| KRH56556 | Soybean | nucleus, plastid | 47.4 | 42.94 |
| KRH63606 | Soybean | plastid | 50.0 | 42.31 |
| KRH10407 | Soybean | mitochondrion | 46.1 | 41.28 |
| KRH07170 | Soybean | plastid | 48.05 | 41.11 |
| KRH54338 | Soybean | plastid | 49.35 | 41.08 |
| KRH03242 | Soybean | nucleus, plastid | 49.35 | 40.21 |
| KRG94119 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 47.4 | 40.11 |
| KRH57118 | Soybean | plastid | 49.35 | 38.58 |
| KRH22937 | Soybean | plastid | 46.1 | 35.86 |
| KRH24932 | Soybean | nucleus, plastid | 46.75 | 35.64 |
| KRH53776 | Soybean | nucleus | 50.65 | 35.14 |
| KRG89044 | Soybean | nucleus, plastid | 46.1 | 34.8 |
| KRH64170 | Soybean | nucleus | 50.0 | 34.68 |
| KRG91848 | Soybean | plastid | 50.0 | 34.68 |
| KRH34918 | Soybean | plastid | 49.35 | 34.23 |
| KRH13283 | Soybean | nucleus | 46.75 | 33.96 |
| KRH20638 | Soybean | nucleus | 46.75 | 33.64 |
| KRH62409 | Soybean | nucleus | 44.16 | 32.08 |
| KRG88909 | Soybean | nucleus | 44.16 | 31.78 |
| KRH17149 | Soybean | cytosol, mitochondrion, nucleus | 50.0 | 30.92 |
| KRH72805 | Soybean | cytosol, mitochondrion, nucleus | 50.0 | 30.43 |
| KRH53127 | Soybean | nucleus | 38.96 | 29.41 |
| KRH57745 | Soybean | nucleus | 50.0 | 27.9 |
| KRH76950 | Soybean | nucleus | 46.1 | 23.36 |
| KRH28509 | Soybean | nucleus | 46.1 | 23.05 |
Protein Annotations
| EMBL:ACUP02001272 | EnsemblPlants:KRH73255 | EnsemblPlantsGene:GLYMA_02G262400 | EntrezGene:100799327 | InterPro:IPR004883 | InterPro:LOB |
| ncoils:Coil | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF57 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRH73255 |
| ProteinID:KRH73255.1 | UniParc:UPI0002336E29 | UniProt:I1JID9 | MapMan:15.5.24 | : | : |
Description
hypothetical protein
Coordinates
chr2:-:44834256..44835310
Molecular Weight (calculated)
17091.5 Da
IEP (calculated)
5.616
GRAVY (calculated)
-0.059
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGNSPCASC KLLRRRCTKD CIFAPYFPSD DPQKFAIVHK VFGASNVSKM LQELPVHQRA DAVSSLVYEA NARVRDPVYG CVGAISYLQN QVSELQMQLA
101: VAQAEILCIQ MEHEPVMPAA SGIDLDYKSY FLQNDLSQFL GFDTSSNVMQ QFCP
101: VAQAEILCIQ MEHEPVMPAA SGIDLDYKSY FLQNDLSQFL GFDTSSNVMQ QFCP
001: MGGPGSSPCA SCKLLRRRCA KDCIFAPYFP PDDPHKFAIV HKVFGASNVS KMLQELPVHQ RADAVNSLVF EANARVRDPV YGCVGAISYL QNQVSQLQMQ
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT
Arabidopsis Description
LBD12PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.