CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10407	Soybean	mitochondrion	83.33	95.93
KRG89044	Soybean	nucleus, plastid	81.31	78.92
KRH24932	Soybean	nucleus, plastid	79.8	78.22
PGSC0003DMT400019410	Potato	plastid	65.15	65.15
GSMUA_Achr7P15500_001	Banana	nucleus	62.63	63.27
VIT_13s0019g03700.t01	Wine grape	plastid	62.63	62.94
AT1G07900.1	Thale cress	plastid	60.1	62.63
KRG91848	Soybean	plastid	66.67	59.46
KRH34918	Soybean	plastid	66.16	59.01
CDY22713	Canola	plastid	56.57	58.64
Bra018675.1-P	Field mustard	plastid	60.61	58.25
CDY06285	Canola	nucleus, plastid	55.56	57.89
GSMUA_Achr8P09700_001	Banana	cytosol	59.09	57.35
CDY15755	Canola	plastid	61.11	55.76
Bra031599.1-P	Field mustard	nucleus, plastid	58.08	55.56
AT2G28500.1	Thale cress	plastid	64.65	55.17
CDY04570	Canola	plastid	60.1	54.59
CDY62454	Canola	plastid	59.09	53.92
Bra035698.1-P	Field mustard	plastid	62.12	53.71
Bra011942.1-P	Field mustard	plastid	63.13	53.65
CDX77182	Canola	plastid	58.59	53.46
CDY31207	Canola	plastid	58.08	53.24
GSMUA_Achr4P16790_001	Banana	plastid	50.51	52.63
Bra000491.1-P	Field mustard	plastid	61.11	52.38
CDX83290	Canola	plastid	61.11	52.38
CDX93609	Canola	nucleus	57.58	50.67
TraesCS1A01G062200.1	Wheat	cytosol, plastid	52.02	50.0
EER92422	Sorghum	plastid	59.09	49.79
GSMUA_Achr10P...	Banana	plastid	62.63	49.6
CDX95115	Canola	plastid	56.06	48.68
KRH50484	Soybean	cytosol, nucleus, plastid	38.89	48.43
Zm00001d035498_P001	Maize	plastid	54.04	48.42
EES18939	Sorghum	plastid	53.54	48.4
HORVU4Hr1G056890.2	Barley	plastid	54.55	48.21
Zm00001d047752_P001	Maize	plastid	58.08	48.12
Zm00001d028721_P001	Maize	plastid	57.07	48.09
TraesCS4B01G197100.1	Wheat	plastid	54.04	47.98
TraesCS4D01G197400.1	Wheat	plastid	54.04	47.98
Solyc06g075330.1.1	Tomato	golgi, nucleus, plastid	58.59	47.93
TraesCS1B01G080600.1	Wheat	cytosol, plastid	52.02	47.91
TraesCS2D01G008400.1	Wheat	plastid	52.02	47.91
HORVU1Hr1G012720.1	Barley	cytosol, plastid	52.02	47.91
KRH43747	Soybean	mitochondrion	42.42	47.46
TraesCS4A01G107300.1	Wheat	plastid	53.03	47.09
KRG89441	Soybean	cytosol, nucleus, plastid	38.89	46.95
KRG97685	Soybean	mitochondrion, nucleus	38.89	46.67
Os03t0287400-01	Rice	plastid	56.06	46.44
KRH14912	Soybean	nucleus	35.86	46.41
KRH73255	Soybean	mitochondrion, nucleus, plastid	35.86	46.1
KRH13706	Soybean	mitochondrion	41.41	46.07
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	24.75	45.37
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	38.89	45.29
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	38.89	45.29
Zm00001d010978_P001	Maize	plastid	48.48	45.28
KRG98217	Soybean	mitochondrion	38.89	44.77
GSMUA_Achr3P17800_001	Banana	mitochondrion, plastid	52.53	44.44
KRH30173	Soybean	mitochondrion, nucleus	38.38	44.19
KRH56556	Soybean	nucleus, plastid	32.32	37.65
KRG93235	Soybean	plastid	31.82	37.5
KRH63606	Soybean	plastid	32.32	35.16
KRH54338	Soybean	plastid	32.32	34.59
KRH07170	Soybean	plastid	31.31	34.44
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	30.81	33.52
KRH03242	Soybean	nucleus, plastid	31.82	33.33
KRH57118	Soybean	plastid	31.82	31.98
KRH64170	Soybean	nucleus	34.34	30.63
KRH53776	Soybean	nucleus	34.34	30.63
KRH20638	Soybean	nucleus	32.32	29.91
KRH13283	Soybean	nucleus	31.82	29.72
KRH62409	Soybean	nucleus	31.31	29.25
KRH53127	Soybean	nucleus	29.29	28.43
KRG88909	Soybean	nucleus	29.8	27.57
KRH17149	Soybean	cytosol, mitochondrion, nucleus	34.34	27.31
KRH72805	Soybean	cytosol, mitochondrion, nucleus	34.85	27.27
KRH57745	Soybean	nucleus	31.82	22.83
KRH28509	Soybean	nucleus	34.85	22.4
KRH76950	Soybean	nucleus	34.34	22.37

Protein Annotations

EMBL:ACUP02008446	EnsemblPlants:KRH22937	EnsemblPlantsGene:GLYMA_13G328500	EntrezGene:100819336	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF6	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH22937
ProteinID:KRH22937.1	SEG:seg	UniParc:UPI000233AC39	UniProt:K7M386	MapMan:15.5.24	:

Description

hypothetical protein

Coordinates

chr13:-:42316419..42318612

Molecular Weight (calculated)

21955.9 Da

IEP (calculated)

5.615

GRAVY (calculated)

-0.324

Length

198 amino acids

Sequence
(BLAST)

001: MESDTNTTFS HSSNTTPSSP PQQVQVVMIP CAACKILRRR CAEKCVLAPY FPPTEPAKFT TAHRVFGASN IIKFLQELPE SQRADAVASM VYEAGARIRD
101: PVYGCAGAIC HLQKQVNELQ AQLAKAQAEV VNMQFQQANL VALICMEMAQ TQTPQESPQQ SVDNFISSPS HSSGYQNNLN FFEENTNNLN SLWEPLWT

Best Arabidopsis Sequence Match ( AT2G28500.1 )
(BLAST)

001: MLKMEINGGV ATPTASAVAK VTETTTPVNS PSPTSSPPPP PSPQQPPQPP VVLSPCAACK ILRRRCADKC VLAPYFPPTD PAKFTIAHRV FGASNIIKFL
101: QELPESQRTD AVNSMVYEAG ARMRDPVYGC AGAIYHLQRQ VSELQAQLAK TQVELVGMQL QRSSLLELIY NMEQTKLSVQ EQGQQKMSFE SSFESGDEFI
201: SSPDEESNDL GFLEDNNNNN NSSMSWWDPL WT

Arabidopsis Description

LBD11LOB domain-containing protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK08]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.